Conserved Protein Domain Family
DUF6055
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pfam19527: DUF6055 
Family of unknown function (DUF6055)
This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and fungi. Proteins in this family are typically between 431 and 744 amino acids in length. Protein in this family often contain a C-terminal pfam16151 domain. These proteins are likely to be cell surface proteins.
Links
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Statistics
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PSSM-Id: 437359
Aligned: 21 rows
Threshold Bit Score: 425.992
Created: 20-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
WP_056187529   15 HFAIAQKTLFTPT----------------EWsdpnnefynkvSSSRKYESTNFVLYWGDKVGTNPAAYSDPA---LRFTP 75   Flavobacteriu...
WP_015801836   32 AASAAAKSVYIPArwtq--------tgevPW-----------AQERTRESANFILLWGEKSGANPVAAPSP----YNFDP 88   Actinosynnema...
WP_097326768   21 PASAAAKTVYIPAswks--------tgevPW-----------SQDRTRESANFILLWGEKSGTNPVSAPSP----YNFDP 77   Paractinoplan...
WP_076379863  176 AAPATGKTIYIPn----------------EWkiaan-niqwdSTNRMKQSPNCVVFWGPLAGNDPTQATNTA---LRFEP 235  Filimonas lac...
WP_076380145   16 CTSLFAKTVYIPTqfst--------apwnEW-----------APNYKYESTNFVIFWGAKVGANPTTYSDAN---LRFDP 73   Filimonas lac...
WP_089784260   15 GSVAAQKTVYIPAefst--------aplnTW-----------SYSKSYQSANFIVFWGNVVGTNPATYSDPN---LAFNP 72   Chitinophaga ...
1_pfamImport    1 PA---GKTIYIPKdlqqmd----lqnpesKW-----------SYHRMVCSDNFVVFWEKGFGNDLANPPQLEgrsMQVDL 62  
CDD50888       30 CGNVKGKEIYIPKdlqgmd----lhnpdsKW-----------SYQRMCCTDNVAVFWEKGFGNDLANPPQLEghdMHVDL 94  
WP_004294263   22 WAKSKEKEIKISAkslkdnk---fgrpdgQF-----------SYDYKAESENLVLFWDKSFGKNPATYADKF---RRFYP 84   Bacteroides e...
WP_084843219   27 ESVVIEKQLKIPEkvwmvpdsndyddpesVY-----------SFSRFRTSNDFAIFWDKEYGEDPSKNENEV---KTFNV 92   Zunongwangia ...

WP_056187529   76 KSVADTLETSFKRYITDLHFINnapTTNFGKYKIIIMMMNTwnstdprLEAFAQASSFSNTIGAMFVH-PEATRDG-GAL 153  Flavobacteriu...
WP_015801836   89 NSVITQLENLYSFYVNTMKFTPe--TGLLAQHKIIVIVTRTwnr--taLDAWATGGSTDGRVGVINVA-PGAALPGsWGL 163  Actinosynnema...
WP_097326768   78 DNILSQLESLYAYYVNTMKFTPe--TGALATYKIDVIVTQTwnr--aeLNAWATGGSADGKVGVINIA-PAAALPGsWGL 152  Paractinoplan...
WP_076379863  236 QKILDSMEAVYDFLMDSMKIIPd--AGQWAKYKLIIVMNNTwrd--glYTGWAYGGNYENQAPAMWVD-PGVFKDNaWTA 310  Filimonas lac...
WP_076380145   74 AAIASYLEASFSYYINTVGFHDn--SGKLGLYKIIVVMNETyng-aggPTGWAFGGAYDEMIGALWIH-PNATRDP-YVI 148  Filimonas lac...
WP_089784260   73 QSICDTLEKIYTKYIKEIKFCSdtsTKNLGKYKIIIVMNDTwgt--ngPSGWAFGGTYGNTIGAMWVH-PNSTRDG-GVL 148  Chitinophaga ...
1_pfamImport   63 ANLLEKLESFYVYFRDTLKFAKp--GSKSEQYRMMVMLNYS-------LEGTAYGGDYDGEIGALWIApNRIQDQKlNCI 133 
CDD50888       95 NNLTNKLEKFYTFFRDSLQFTKp--GSKSDRYRMMVMINYS-------LEGTAYGGDYDQQIGALWVApNRIQDEKlNCV 165 
WP_004294263   85 DEILREGERFYTYYVDKLKFADk-kKSLSSRYKMIIWMYND-------DKTTAYGWG-EDGVGMMWMRpCRAQSYPyCAL 155  Bacteroides e...
WP_084843219   93 DSLILEGERFFNYYVDELQFLEk-gKSTTDSTKILMYVFGG-------DDGTAYGAG-KDSIGMLWSPaVRIHKPPyGAL 163  Zunongwangia ...

WP_056187529  154 SHEFAHTLQMMMHIQen-pGNGTAFSGYDWAGa------FFEGHANFMRAQAYSQWSeIDG-TLTRWIQTKHFMWSSNRH 225  Flavobacteriu...
WP_015801836  164 AHELAHVFQNYTFLG----RSGVGFTA-PYSGt------FWETSAEFMAMQALPTTAaG---DLTRWLRSENLYWSSSRH 229  Actinosynnema...
WP_097326768  153 AHELGHVFQNLTFLG----RPGYGFTD-ASAGt------FWEASAEYMAMQVYPDGGaG---DLTRFLRTENLAYSSSRH 218  Paractinoplan...
WP_076379863  311 THEFTHTIQSMITVM----YPGHGYTNTN-SGf------FWETHANFMAFQRYPTFAtAA--DMPRAINLSSYFLGSGRK 377  Filimonas lac...
WP_076380145  149 AHELAHSLQNQNRIDfkpgGNQGGFNNYEPAGy------FWETHANYMRCLQYPTVAsD---DLPRWLMTRQYYIGSTRH 219  Filimonas lac...
WP_089784260  149 SHELTHSLQGMISIQe--nTVGGGYINYEPSGf------FWEAHANYMRTQMYPRFAgD---DLPRWFGTEMFHWSSTRH 217  Chitinophaga ...
1_pfamImport  134 AHELGHSFQAQISCD--------------KQGeawggcgFFEMTSQWMLWQVNPEWItDEKyHWDAFMKLTHKAYLHLEN 199 
CDD50888      166 AHELGHSFQSQISCD--------------GEGeawggsgFFEMASQWMLWQVNPDWQtDEKyHWDAFKKLTHKAYLHLEN 231 
WP_004294263  156 AHEMGHSFQFMVGAD---------------GSrgfaghpLVEYTSQWMLWQVYSDWTtIEQfHLDAYMDQTHYSLLNEIN 220  Bacteroides e...
WP_084843219  164 AHELGHSFQYLTGAD-------------GHFGfkn-ggsIWEMTSQWMLWQVYPNWIeFENyHLQAFLDNTYRAFLHEEN 229  Zunongwangia ...

WP_056187529  226 HYTNFHLMYYVQEKE-GFDFTRRMWAE--SINEEHPLQTIKRLKGFTQDQLDDYLWGYAQRQPAFDYPIQWNSQINTTsn 302  Flavobacteriu...
WP_015801836  230 HYGNWMLMQYIKDRD-GLPMFNRIWNE--ATSSEHPLDTYRRIAGITQAELNRRIGEYATRNVTWDFGNRSTLMPFIDnv 306  Actinosynnema...
WP_097326768  219 HYGAWMLIQYLVDRNgGVSIFNRLWNE--ARGGEHPLETYRRLMGYSQQQLNTDLAGYAQRQVTYDYTNKSHFQRFVDtv 296  Paractinoplan...
WP_076379863  378 HYAQFYFLQQFKDDY-GIDFVSRLWREanATAAETPLEVAKRLLGMDQTAFSDYMMRYAAKSVKWDFsnk---------- 446  Filimonas lac...
WP_076380145  220 HYSTFKWLMNIQQNYgGINTVNRLWRE--SVANEVPTETWRRISGWTQAQLNDAMYDYAKREVNCDY---------PAqs 288  Filimonas lac...
WP_089784260  218 HYGTFKLLYTIQQLD-GIGMVNRLWKE--SLANEHPLITYRRLKGWTQSQLNDFAYEYAKREPTYDY---------AIng 285  Chitinophaga ...
1_pfamImport  200 IYHSPYVIEYWGMKR-GLPFIAELYRQ--GKRGEDPVMTYKHLTGQTQEQFCDEMFDACCHFINWDFPRVWDATRPYA-- 274 
CDD50888      232 IYHSPYILEYWGMKR-GRPIIAELFRK--GKKGEDPVMTYKRLTGLSQEAFCDEMFDASRHLVNLDFERVWKNTRPYA-- 306 
WP_004294263  221 QYHAPQFMEYWSNKH-GLDIIARIWKE--AVGKEDPVLAYQRLTRINQEQFNDEIYEAATRFVTWDIPRVERVCSSYA-- 295  Bacteroides e...
WP_084843219  230 MYHSPFVLEYWSNKH-GKTFIGELWRN--SKKGEDPVLTYQRLTNIDQKTFNDEIFDASRRFVTWDMPRIEEVSSEYA-- 304  Zunongwangia ...

WP_056187529  303 fgktirsvyNSIKTNmpryts--rqytlLTKVtgTTDQYYTNNDWAPQDYGMNVIPLY--PTCAGtqKKVTIKFKGHTE- 377  Flavobacteriu...
WP_015801836  307 ygsgflkayNGg---------------lVEAVdaGAGHFRMNTRTAPSDYGFNKIKMV--PTTNG--GLVKVRVKGH--- 364  Actinosynnema...
WP_097326768  297 ygagfinayNGV------------------PVqaVGNHYAIPAALAPSDYGYNKIKLV----PSG--STVRMRFKGH--- 349  Paractinoplan...
WP_076379863  447 -------nyLVASEKsldrvwkfrktvlLDSL--GEGHFAIPDNQAPQQFGFNIVRLYpqAEDGCqqPYVYMKFKGH--- 514  Filimonas lac...
WP_076380145  289 fgadmrdqlNIYKTSaaenhwlwrqytiLTQIsaTTNRYIVPKNMAPQDQGINIIPLY--PNCAS--NTVHVKFKGHTE- 363  Filimonas lac...
WP_089784260  286 fggimraerDRLKTQephyvw--rmhtvLQQIsaTTGRYVVPDAFAPQDYGYNIIPLY--TTCSS--RNVTVKFKGHTE- 358  Chitinophaga ...
1_pfamImport  275 ---------CKYTCK-------------LDSL--AGGSYQVAAGNAPENYGFNAIPLS--IPAPG--KVVEVTFRGLVDa 326 
CDD50888      307 ---------NQYDCK-------------LTKQ--TDGWYQVPVEVCPENYGFNVIPLV--VPEPG--TKVTLQFEGLKGp 358 
WP_004294263  296 ---------NQHRCK-------------LDKA--NEGWYQIAQSRCPQNYGYNVIRLN--VPEGG--KVVSLDFKGIAGd 347  Bacteroides e...
WP_084843219  305 ---------NIHHTK-------------LDKI--EDDWFQISAKEAPQNYGYNAIPLK--VP-TS--EKVKLKFEGIIEs 355  Zunongwangia ...

WP_056187529  378 ------VNPTQ-AGWRYGFVTTKTDGtISRYSPMyk-tDGE---ASFTLNt-GTEANIFLVVFSAPKVHV-----NYNMD 440  Flavobacteriu...
WP_015801836  365 ------TETGA-AGWAFGMVALRNGG-SPRYSPVtvatDGQ---IDFQLQ--SGENEVYLVVTGTPNSVP-----RYAFL 426  Actinosynnema...
WP_097326768  350 ------VNAAAgSGWSYGFVAVNNG--VPRYGPVstaaDGQ---ISFTLQ--GGERELYLVVLGAPAAVH-----HYGFL 411  Paractinoplan...
WP_076379863  515 ------VDANAsSGWRYAFVTVDSTTgNSVFSDFykedAAE---IIYKLP--ANTSETYLVVMGAPTQMHfq--kSTLFE 581  Filimonas lac...
WP_076380145  364 ------VNGQ--AGWRWGFVEVLANGtTSVYGATqsssDSE---ATYTLT--ASTSKLYLVVMGAPTAKH-----DYVWE 425  Filimonas lac...
WP_089784260  359 ------VNAT--AGWRYGFVAENADGtVSRYGALnsanEGQ---ISFQMN--TNETKLYLVVMGAPTTHT-----SYVWE 420  Chitinophaga ...
1_pfamImport  327 kg-ttfVNPDK-AGWRYGFVGVTSSG-ETIYGQMkrgkEGK---ARFSTPqgKELTHLYLVVMGAPTEHWmnp------- 393 
CDD50888      359 qdgyvsVHPEK-AGWRYGFVAVKADG-KSLYGEMsakqKGK---LTFKTPenEKLVYLWLVVMGAPEEHWmnp-----sp 428 
WP_004294263  348 ea-frsVQTDK-AGWRYGFVAVKKSG-ERVYGKMnkgrNGAnetVRFETP--QDTQFLWLVVTGAPTEHWevlksWGELA 422  Bacteroides e...
WP_084843219  356 ee-fniLKPEI-AGWRYGFLAVSENG-ERHYGKMysqaKNE---ISFEIP--QTTAHLWLVVSGAPTEHF-----IHKID 422  Zunongwangia ...

WP_056187529  441 VGYPKQRRYPYELKIANATPEG 462  Flavobacterium sp. Root420
WP_015801836  427 DGYNAAKRYPYEFRVSGATPSG 448  Actinosynnema mirum
WP_097326768  412 DGYTRNYHYPYEFALAGAVPSG 433  Paractinoplanes atraurantiacus
WP_076379863  582 PGFPKIYRYAWDIQLQGAVPQG 603  Filimonas lacunae
WP_076380145  426 PGWPRQYRYPYELRIENALPEG 447  Filimonas lacunae
WP_089784260  421 PGWPKIKRYPYEIRIANAVPEG 442  Chitinophaga sp. YR573
1_pfamImport  394 npPEKDAQWPYQIKLTGCKLNF 415 
CDD50888      429 RSGEKDAQWPYRIKLKGTDLKN 450 
WP_004294263  423 KEKGKEAQWPYQVRLNGTSLHS 444  Bacteroides eggerthii
WP_084843219  423 GNPDNDEQWPYKLKFENTNPKN 444  Zunongwangia atlantica
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