5XQG


Conserved Protein Domain Family
PcRGLX_1st

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pfam19501: PcRGLX_1st (This model is not part of the current CDD release)
PcRGLX-like N-terminal RIFT barrel domain
This family of proteins includes Exo-rhamnogalacturonan lyase from Penicillium chrysogenum 31B (PcRGLX). The family also includes YetA from B. subtilis is functionally uncharacterized. This family of proteins is found in Actinobacteria, Firmicutes, Proteobacteria and fungi. Proteins in this family are typically between 863 and 928 amino acids in length. This entry represents the N-terminal RIFT barrel like domain. Members of this family share a 3 domain architecture.
Statistics
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PSSM-Id: 523700
Aligned: 50 rows
Threshold Bit Score: 96.94
Created: 20-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5XQG_A         6 SSATVHWLGDK-PTYHag-vTFGLPWPQGKYRPqETSFSLTGDTEDKSELQSWATGYWADGSLKWTAHAIAESNQIYDQY 83   Penicillium ch...
WP_092631119  42 QPTELHWLGKA-PETPvn-tTWGVPWSRGEMAA-DTSFALTTADGDPVPVQSWPLAYWPDGTLKWSGHTAAANAA-AGEY 117  Actinopolyspor...
ESQ82581      60 PDTVAHWLDGDaPIHFeg-gAFGVPWPRGAVNA-NAAFSLSSSSGEL-AVQSWPAAYWPDGSLKWSGHAVVSSSAPAKAY 136 
OXM59866      41 GEVRLHWLDGK-PAAPvg-cAFGVPWPRGTLSR-TVPLALHAADGAPVPVQSWPLAYWPDGSVKWTGHAVTSSAT-AETF 116 
CCO36870       9 DGVDLHWLDGKaPSTTanpsTWGVPWTKGEIDK-STALALTASDGKNIPIQSWPLAYWPDGSLKWTGHAVAADTALSDTL 87  
WP_077011898  44 RQAALAWLEGGaPATHag-tTWGVPWPRGVFGK-DQTFALTTASGEQVPVQTWTTGVWPDGSLKWSAHAISGPTA-ADGY 120  Saccharothrix ...
WP_046256365  36 DDTELHWLEGAtPDAHag-tTWGVPWARGTYRP-EQNFRLTTAAGNDVPVQSWVTGHWPDGSVKWTAHAIAPGAPKASAY 113  Streptomyces s...
WP_077007304  46 DGVQLRWLEGGtPRQQaagcTWGVPWPKGAVPE-DQPFALRTTAGQQVPVQTWATAYWPDGSLKWTAHAIGTEVPPAEQY 124  Saccharothrix ...
WP_090765074   3 HTTGLRWLDR--PGEQg--tTWGVPWPRGALRP-GTPFALTGADGREVPVQSWVTATWPDGSLKWTAHAAGAGPA-AEAY 76   Nonomuraea mar...
WP_091046229  53 DSVELKWLEGA-PAVSpg-sTWGVPWGPGRFGA-EQTFKLTGADGAAVPVQTWPLAYWPDGSLKWTAHAVGPAAT-HESF 128  Glycomyces sam...
5XQG_A        84 TVTAS 88   Penicillium chrysogenum
WP_092631119 118 RLKPG 122  Actinopolyspora mzabensis
ESQ82581     137 KLTLG 141 
OXM59866     117 KLTPG 121 
CCO36870      88 HLAPG 92  
WP_077011898 121 RLEPG 125  Saccharothrix sp. ALI-22-I
WP_046256365 114 KLAAG 118  Streptomyces sp. WM6386
WP_077007304 125 VLAGG 129  Saccharothrix sp. ALI-22-I
WP_090765074  77 RLEPG 81   Nonomuraea maritima
WP_091046229 129 TLEAG 133  Glycomyces sambucus
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