Conserved Protein Domain Family
Csd3_N2

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pfam19425: Csd3_N2 (This model is not part of the current CDD release)
Csd3 second domain
This entry represents the second domain from the Csd3 peptidase. This domain has a similar structure to pfam18059 despite low sequence similarity.
Statistics
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PSSM-Id: 523667
Aligned: 12 rows
Threshold Bit Score: 233.854
Created: 20-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_128174837     180 KGEWKNSVLSGVVDGSFVNSAQKAGLTSGEISGVVKAMQWQMDFRKLRKGDKFSVLMSREMMDGKREQSQLLGVRLNSGG 259 [Pantoea] b...
WP_013317806     210 EGDWQNKVLIGRLDGSFASSAQAAGLTSSEVREVIRALQWQLDFRKLRKDDSFAVLISREILDGRSEQSELQGVRLRTGG 289 Dickeya dad...
WP_021015701     198 EGEWHNSVIAGRLTSSFVNSARSVGLTTNEIREVIKALQWQLDFRKLHKDDSFAVLMSREVLAGHNEQSELLGVRLRSGG 277 Pectobacter...
WP_371004867     196 EGEWQTKRLTGKVSGSLNASASKAGLTRSEVRDISKALQWQVDVRKVKNGDRFTVLTSREMLDGKQEQSQMLAVRLHTNG 275 Morganella ...
1_pfamImport       1 KGEWINSVITGAVDGSFTGSALSAGLTSSEAREVTKALQWQIDFRRLRKGDQFSVLMSREMLDGKSEQSQLLGVRLQSGG 80 
WP_170143398     194 EGVWEPFSVSGEIDSNFIADAKNLGLTSNEIATITKALQWQLDFRRLKKGDKFSVLLSREMLDNIHENSQLLAVRIRNGS 273 Orbus hercy...
WP_110021849     196 EGIWKPFNAQGLIDSNFVVDAKKQGLTSSEIATITKALQWQLDFRRLKKGDKFSVLISREMFGDNHENSQLLAVRIQNGN 275 Frischella ...
WP_002440342     182 QGDWVNNVLNGRVGSSFVTSARNAGLTSNEVSAVIKAMQWQMDFRKLRKDDQFSVLMSREILAGKREQSQLLGVRIRASG 261 Shimwellia ...
wugsc:SARI_01056 158 QGDWVNSLLKGTVGGSFVASAKEAGLTSSEISAVIKAMQWQMDFRKLKKGDEFSVLMSREMLDGKREQSQLLGVRMRSDG 237
WP_036111732     187 QGEWVNRVVKGKVSGSFVASARAAGLSSNEVNDVVKALQWQMDFRKLKAGDEFSALISREQLDGKRAQSHLLGVRLKTGG 266 Mangrovibacter
EFE94998         159 KGEWRNQVLAGSLKGSFVSSASAAGLSRSEINAVIKALQWQLDFRKLRKGDQFSVLMSREQFEGKSEQSQLLGVRLRSGG 238
WP_092878526     184 KGDWSNKVLRGQLNGSFVASAQAAGLSRNEISAVIKSLQWQLDFRKLRKGDRFSVLISREMLNGKRQQSQLIGVRLETAG 263 Izhakiella ...
WP_128174837     260 KDYYAFRSEDGKFYDRSGSGLARGFMRFPTVKQYRVSSNFNP 301 [Pantoea] beijingensis
WP_013317806     290 KNYYAFRAEDGKFYDREASGLTRGFLRFPTMKQFKVSSNFNP 331 Dickeya dadantii
WP_021015701     278 KDYYAFRADDGKFYDREGSGLSRGFLRFPTMKQFRVSSNFNP 319 Pectobacteriaceae
WP_371004867     276 RDYYAFRAEDGRFYDAKGDGLERGFLRFPTTRQFRVSSHFNP 317 Morganella morganii
1_pfamImport      81 NNYYAFRAEDGRFYDSNASGLERGFLRFPTTKQFRVSSPFNP 122
WP_170143398     274 KDYYAVLAEDGHYYDMNGGSLSQSFLRYPLVKQARISSAFNP 315 Orbus hercynius
WP_110021849     276 KDYYAILAEDGHYYDKNGGSLSQNFLRYPLAKQARISSGFNP 317 Frischella perrara
WP_002440342     262 KDYYAIRAEDGKFYDRNASGLAKGFLRFPTVKQFRVSSSFNP 303 Shimwellia blattae
wugsc:SARI_01056 238 KDYYAIRAADGKFYDRNGVGLAKGFLRFPTAKQFRISSNFNP 279
WP_036111732     267 KDYFAIRADDGKFYDQNGNGLAKGFLRFPTSRQFRVSSNFNP 308 Mangrovibacter
EFE94998         239 KDYYAIRAEDGKFYDRQGSGLARGFMRFPTMKQFRISSNFNP 280
WP_092878526     264 KSYYAIRAEDGKFYDRNASGLARGFMRFPTVKQYRVSSNFNL 305 Izhakiella capsodis
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