Conserved Protein Domain Family
Clink

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pfam19411: Clink 
Cell cycle link protein Clink
This entry represents the cell cycle link protein Clink from Banana bunchy top virus (BBTV) which was identified as a suppressor of RNA silencing. It interacts with retinoblastoma-related proteins (pRB) and S-phase kinase-associated protein 1 (SKP1). Clink contains LxCxE and F-box motifs that mediate the interactions with the respective proteins and the capacity of Clink to bind pRB correlates with its ability to stimulate viral replication. pRB is a key cell cycle regulator, which represses onset and progression into S-phase by interacting with a wide range of cell cycle-related proteins.
Statistics
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PSSM-Id: 437243
Aligned: 2 rows
Threshold Bit Score: 287.361
Created: 20-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
YP_001661659   1 MEFWNSEAFCDDVKRVIKQKYWEERMKSLFIEKVSGYVRRILVYGNLDDTIYAVQQMKTSIVQCAERFGKACVVVYNGLD 80 
1_pfamImport   1 MEFWNSEAFCDDVKRVIKQKYWEERMKSLFIEKVSGYVRRILVYGNLDDTIYAVQQMKTSIVQCAERFGKACVVVYNGLD 80 
YP_001661659  81 PSIGFRLHTMAFFFEEYVEEVSTADPMAVQLFCDEEIEEFSNSDVRLIKNVIMASTDASID 141
1_pfamImport  81 PSIGFRLHTMAFFFEEYVEEVSTADPMAVQLFCDEEIEEFSNSDVRLIKNVIMASTDASID 141
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