Conserved Protein Domain Family
DUF5942

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pfam19366: DUF5942 
Domain of unknown function (DUF5942)
This presumed integral membrane domain is functionally uncharacterized. This domain family is found mainly in cyanobacteria, and is approximately 190 amino acids in length. The family is found to the C-terminus of pfam00082.
Statistics
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PSSM-Id: 497966
Aligned: 27 rows
Threshold Bit Score: 298.063
Created: 20-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_015150505     411 DFGHFFSDFFRWLRDNGYLNPRFWIDGGVYALLPKVLMVVGSYLIAWLLKMYFPFSWTMSMATGLVAGSSGLFVFRGFYI 490 Oscillatori...
WP_015229976     400 RGQISVRDFVRWMRDNGYLNPRFWIDGGTVMLPFKLATVIGGYLLAWFLRNYFPFAWSWALGSGIIAGSSGLFFLKGFYI 479 Dactylococc...
WP_015162485     399 KGKITFNDFFRWLRDNGYLNLRFWIDGGAIALLPKVAMVLGSYLLAFLIRNYLP--FGLPLSSGLIAGSSGLFFLKGLYI 476 Chamaesipho...
WP_006529577     399 RGQLSFRDFFRWIRDNGYLNPRFWIDGGAVALLPKIAMVLGSYLLAWLLRNYFPFGWSWSLSNGLILGSSGLFLFRGFYI 478 Gloeocapsa ...
WP_015192996     399 KGQITFKDFFRWLRDNGYLNPRFWIDGGAIALLPKIAMVLGSYLLAWVLRNYLP--FNLSLQSGLIFGSSGLFFLQGLYV 476 Stanieria c...
jgi:Cyast_0428   398 KGKITVKDFLRWLRDSGYLNPGFWIDGGTIMLLPKLGMVIGSYLLAWFIRNYLV--FNFNLASGLVFGSSGLFVLQGLYI 475
BAZ43835         395 KGQITVNDFLRWLRKSGYLNPGFWLDGGAVALLPKLGMVIGSYLLAWFLRNYLP--FSFGLNSGLIFGSSGLFFLQGLYI 472
WP_022607882     399 EGKLNLKDFFRWLRDNGYLNPVFWIDGGMVALPLKLAMVLGSYLLFWLLRAYFPFAWSWPLAGGLVTGSSGWFVARGLYV 478 Rubidibacte...
WP_017287731     420 HGKITFNDFFRWLRDNGYLNPRFWIDGGVVALLPKIAMVLGSYLLAWFLRVYFPFNWSWAMGSGLVAGSSGLFLLKGFYL 499 Leptolyngbya
jgi:GEI7407_3763 415 QQQISPRDFFRWLRDNGYLNPRFWIDGGAVAIAPKIAMVLGSYLLAWILRRYFPFRWSWGMASGLVAGSSGLFFLRGLYL 494
WP_015150505     491 FDLPQWPFRILGSSIPELGTAISGSSAFNPLFASVIIPVGLILLLLGHPQWKWFAIGSTIGVATCLGISAVLapAPTLLW 570 Oscillatori...
WP_015229976     480 FDLPQAPFRVMGSSIPELGNAIQGSPILNPFFASVLIPLGLILLLLQHPRWRWFAVGTSLGVASFLAMSAIV--SPAVWG 557 Dactylococc...
WP_015162485     477 FDLPQAPFRVLGSSIPELGNAISGNSILNPVFASVLIPLLLLVVCWSLPAGKWFAVGTSLGVAACLLVNAVI--DPHVWV 554 Chamaesipho...
WP_006529577     479 FDLPQWPFRLLGSSLSELGNVVQGTTLLNPLFASVLIPFLLIGLLSSNQVGKWFAVGCSLGMASALGVMAIA--SPDLWL 556 Gloeocapsa ...
WP_015192996     477 FDLPQWPMRLFGSSLPELGNTVVGSATFNPLFASVLIPFALISFLSGHQTLKWFAIGSSLGVAACLGISAVV--DPAVWG 554 Stanieria c...
jgi:Cyast_0428   476 FDLPQWPMRLFGSSLPELGNVVMGTNSLNPIFASVLIPFILIVLFLGHQSLKWLAIGSCLGVASCLGISAFY--DPHVWG 553
BAZ43835         473 FDLPQWPMRLFGSSIPELGNVILGKSSLNPLFASVAIPLVLTIFLLGHPSLKWFAIGSSIGVAACLGVSAIA--EPNMWL 550
WP_022607882     479 SDLPQWPLRMLGSSLPELGSALQGNPALNPLTASVLIPLALVVLLLGHPVWKWFAFGASLGVASCLFVSAIA--DPNVMW 556 Rubidibacte...
WP_017287731     500 FDLPQFPFRILGSSLPELGSAVQGSAALNPISASVLIPFLLLALLLGHSWGKPFAIGATIGVAACLGISAIV--DPQVMW 577 Leptolyngbya
jgi:GEI7407_3763 495 FDAPQWPFRVMGSSIPELGNAIQGTSALNPIFASVLIPGFLILLLLGHPQARWFAIGTALGISVCLATSAAI--APSLMW 572
WP_015150505     571 IGSGIGARAFLLVNACLCLALARLAMKDEGQIA 603 Oscillatoria acuminata
WP_015229976     558 LGSGAIARSYLLLNALLCWGLGRLATRDEKAVS 590 Dactylococcopsis salina
WP_015162485     555 LGDGGLARGFLVVNGLLCFGLARFAARGDSQTV 587 Chamaesiphon minutus
WP_006529577     557 IGTGAIARGFLVVNALLCFGLGYLASQGEAQVL 589 Gloeocapsa sp. PCC 73106
WP_015192996     555 LGSNAIAQGFLAINAILCFGLAYLASQGEKQKH 587 Stanieria cyanosphaera
jgi:Cyast_0428   554 LGSGIVAQGFLLVNALLCFGLAYLASKNDQVLT 586
BAZ43835         551 LGSGAIARGYLMINALLCLGLAYLAALKEKRRA 583
WP_022607882     557 LGSGLMARTYLFANGWLCVGLVMLACKGQQRKA 589 Rubidibacter lacunae
WP_017287731     578 LGDGWIGRAYLSINALLCFGLARLALKPKDRWV 610 Leptolyngbya
jgi:GEI7407_3763 573 LGSGLGARLFLGINALLCLGLARLALRTEDAIA 605
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