Conserved Protein Domain Family
DUF5927
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pfam19349: DUF5927 
Family of unknown function (DUF5927)
This entry represents a presumed domain that is functionally uncharacterized. This domain family is primarily found in Rhodobacteria, and is approximately 300 amino acids in length. The family is found to the C-terminus of pfam02485 and so is likely to have a role in carbohydrate modification.
Links
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Statistics
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PSSM-Id: 497951
Aligned: 84 rows
Threshold Bit Score: 433.861
Created: 20-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
SHJ00658      271 RKIWPHADRLYDAFLTAETGTPALADPNPGKIDRLFAKAVERRTRGRPGLYMQSRFPNRDWENGLTSSRYSVFEGFAELF 350
WP_074220489  266 RKIWPRADRLYDAFLGADGSQATCAEPNPAKIDRLFTKAVDRRTRGRAGLYMQSRFPRDGWENGRTCAPYSVFEGFAELF 345 Rhodovulum sp....
WP_093968292  266 RKIWPQADKLYSSFLSNDPAVTKNTEPNPGQIDRIFTKAVERRKKGRPGLYMHSRFPKEEWENGKTCARYSVFEGFSDLF 345 Actibacterium ...
KAJ57309      267 RKIWPKADKLYSSFLSNDPSVTKNAEPNPGKIDRLFSKAVDRRVRGRSGLYMQSRFPRDGFENGKTCAGYSVFEGFTELF 346
WP_048598504  266 RKIWPQANILYDTFLQKNEGTVPQTEPAPAKIDRIFAKAVERRVRGRNGLYMQGRFPHAGVEGAMTAAPYSVFCGFNDVF 345 Nereida ignava
WP_092076681  266 RKIWPGAEALYARFLSAKPPLARPERESPGRVARVFDRARARRTEGRPGLYMQSSFPHGFLNAQKTPGPYAVFSGFDDVF 345 Poseidonocella...
WP_090208415  266 RKIWRDAELLFQTFPQPSAPDQIDAEPNTGAVDRLFSQAVERRTYGRPGLFMQSRFPSSDRQAVLTASPYAVLQGFDDIF 345 Yoonia litorea
jgi:Dshi_3580 196 RKVWPRADRLYAQLLDPALGAPEQGPSDPHRIEQTFEEAMQRGREGRPGLFMQSRFPSDTWQSGKTAAPYFAFQGYDEVI 275
WP_089884534  265 RKIWPRANRLYAAFLGEGLPPAIRQDPQPGKIDRVFAKAVERRLRGRPGLYMQSRFPRLGHENGVTAGRYAVFHGFEPLH 344 Citreimonas sa...
WP_076649959  266 RKIWPHAEGLYRAFLGDGQKSPARADPAPARIDRLFLRATERRTRGQPGLYMQSRHPNPGWENGLTAAPYSVLGGFAELF 345 Pontibaca meth...

SHJ00658      351 DDFESWLARATGTRVHGHLFAPGRVEFEGRQSVFTGALTDDARLRDRDRWMFLTNLLWNTRGERQCFQFGPGDAlpraaa 430
WP_074220489  346 ENFEDWLGRNVGVRVHGHLYHPERVQFAGGACVYHGGLSDRAAVRDYDACAFLRRLVWNTRGERQCFQFGPGDR------ 419 Rhodovulum sp....
WP_093968292  346 ENFETWLFKAVGGRVHGHLFHPDSVQFAGGETIYNGGLSNSAALRDYEPKAFLTSLIWNTRGERQCFQFGPGDA------ 419 Actibacterium ...
KAJ57309      347 EDFETWLFKVAGGRVHGHLFHPKGVQFSGKEAFYNGALSDSAALRDAAPSSFLTNLVWSTRGERQCFQFGPGDE------ 420
WP_048598504  346 EGFLDWLPRATPVRVHGHLFARDKVHFAGGEPSFTGALSDSAAVRDYAPRDFLTSLIWNTRGERQCFQFGPADV------ 419 Nereida ignava
WP_092076681  346 PEFQDWAARSAGQHAHGHLFAPNRAEFAGGGRVYDGALSDNARLRDYNPKAFLTNVLWNAQERPHSFLHGPEDK------ 419 Poseidonocella...
WP_090208415  346 PDFQRWLARRTGAEVHGHLFARDRVHFADGVELYRGGLSDHPRLRDYNPKMFLTNLIWNAREKHHCFQFGPADS------ 419 Yoonia litorea
jgi:Dshi_3580 276 EGFAPWLAQRSGARVHGHLFDWTEVQFAERVRCFNGGLSDAVSLRDYNPQAFLTNLIWNSRGEPQCFQIAPYDR------ 349
WP_089884534  345 DGFCAWLADATGARVHGRLFSPERAHFAEGEAVGPGALTDDAGLRDYNPKAFLTNLLWNSRGMQHCFLYGPDDT------ 418 Citreimonas sa...
WP_076649959  346 DDFPGWLARATAARVHGHLFAPGRAEFCGGESTVQGALSDSAAKRDYDPRAFLTSLVWNTRGEHQAFLFGPRDN------ 419 Pontibaca meth...

SHJ00658      431 pggprgaaqpeagalratstQaEFSWRLARDPNAEIFVISGAWAIPLFRSGGGFAELRRQAARLQSIEADHLGILRSPHA 510
WP_074220489  420 --------------------Q-DVSWFMAGDPNAQISVITGAWAVPLFLSRRSFADLRKRAAELQRIESAHLDILRSPHT 478 Rhodovulum sp....
WP_093968292  420 --------------------Q-QISKFMAMDTNAQISVITGAWAVPLFKSSDNFAYIRREAAALQKIEAKHLQILRSTHA 478 Actibacterium ...
KAJ57309      421 --------------------Q-GVSWFMATDSNAQISVISGAWAVPLFKSSNNFSFIRREAAALQKIEAQHLDILRSQYT 479
WP_048598504  420 --------------------Q-DLNWKLALDPNAQISVISGAWAVPLFHSTRPFAEVRVEAARLQRVENKFLEILKTPYV 478 Nereida ignava
WP_092076681  420 --------------------Q-DIADFFAQDARAHVFVITGAWAISLCATGQTAQELRTQAAWLQKTEARFLDRLHNRDT 478 Poseidonocella...
WP_090208415  420 --------------------Q-GICWTLAKDTNASIWVVTGAWSVPLFLSGRSASEVRAEAARLQRIENKFLKVLRSPQV 478 Yoonia litorea
jgi:Dshi_3580 350 --------------------Q-DLNDYMMWDPNAHISIITGAWALKLFRSDLPFRDARREAAWMQKVEDHFLGQLRRRGL 408
WP_089884534  419 --------------------P-EILWHIARDPNARISVVSGAWAVPLWRSDAPFDVVRARAAKLQRAEAAMIDALRAPDV 477 Citreimonas sa...
WP_076649959  420 --------------------Q-QIAPFLAADPNARITVILGAWAVPLFRSARPFADLRREAAALQRIESAHLELLRQPRA 478 Pontibaca meth...

SHJ00658      511 KARVRIWTMADFVDAPMEGLQAVVDEMGHGIWRRLAEVPRMADLDGFGQFLQNLKNQGMHPYLMGDFPAGPAPVRRPPAK 590
WP_074220489  479 RARVRVWTMADFVQNPIEPLQILVDEIAPRAQHHLTEVPLMADLAGFGQFLQDLRNRGMTPYLMGDFPARDDRPRRPART 558 Rhodovulum sp....
WP_093968292  479 KAQVRVWTMADFIQNPMEPLQEIVDDIAPRGQHRLAEAPQLVNLDGFGQFLQNLKNQGMHPYLMGDFPVGDDLQASAAKP 558 Actibacterium ...
KAJ57309      480 NARVRIWTMADFILNPMEPLQIIIDEIAPRGRHRLTEAPKMADLTGFGQFLQDLKNQGMHPYLMGDFPVGDDPRSRPKPG 559
WP_048598504  479 KAKVRAWALADFIEAPMDALQDIVDEMGQKPPRRLTEVPKMVDLTGFGQFLQSLKNEVMHPYLMGDFPLSSVEAAPVPEP 558 Nereida ignava
WP_092076681  479 QAQIHIWTLAEFLARPMDRLQGVLEDIATPQLRRLTEVPRLADLSRLPQFLQDLKNMGMHPYLTGDFAEGMAEVVTD-AE 557 Poseidonocella...
WP_090208415  479 RARVRIMSLAEFVEAPMDVLQTIIDEIAGHKGRAISEAPRMADIEGLAAFLQDLKNQGMHPFLTGDITALTVQTRRRQSR 558 Yoonia litorea
jgi:Dshi_3580 409 PSRVRVTSLAEFVADPVGQLQDVLDQMTPVSQRRLAAPPPLVDLAGFGGFLQALKNAGMKPYLTGDFPLDTAGLGQPTTP 488
WP_089884534  478 KARVRIQTMAEYLEAPAETLKSIVAEIGwRDGADRSASPSTVELLGFGQFLQRLRNEGMDPYLAGDFPLLS--STPRQPE 555 Citreimonas sa...
WP_076649959  479 GARIRVWSMADFIEAPLESLQVVIDNIVPGPKQHLTPLPRLVDLDGFGQFLQDLRNQGMHPYLMGDFPLEQKQDAESEPS 558 Pontibaca meth...

SHJ00658      591 RKPYLVR 597
WP_074220489  559 SSPYLMR 565 Rhodovulum sp. ES.010
WP_093968292  559 QRPYLVK 565 Actibacterium lipolyticum
KAJ57309      560 RRPYLVK 566
WP_048598504  559 RRPYLVR 565 Nereida ignava
WP_092076681  558 RIT-AAG 563 Poseidonocella sedimentorum
WP_090208415  559 RKPYIVA 565 Yoonia litorea
jgi:Dshi_3580 489 AKPYLVT 495
WP_089884534  556 PRRYIAS 562 Citreimonas salinaria
WP_076649959  559 RKPYLVH 565 Pontibaca methylaminivorans
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