Conserved Protein Domain Family
SrpI-like

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pfam19307: SrpI-like (This model is not part of the current CDD release)
Type 2A encapsulin shell protein SrpI-like
This entry includes type 2A encapsulin shell protein SrpI from Synechococcus elongatus and its homologues from Mycobacteria, from Mycobacterium leprae, which forms a large 950 kDa complex with itself. It has been described as the most antigenic protein in human leprosy patients, being useful for serodiagnosis of leprosy. Some members of this family contain an N-terminal cyclic nucleotide binding domain pfam00027. This family includes proteins annotated as phage capsid proteins, suggesting that in bacteria this protein is a co-opted phage protein. There is a clear evolutionary relationship between the bacterial encapsulins and Caudovirales bacteriophages as they share the HK97 fold of the capsid proteins.
Statistics
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PSSM-Id: 523618
Aligned: 114 rows
Threshold Bit Score: 327.939
Created: 20-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_036938402 207 WLSKKKAVNENQEKLISIKSGKMGEYELPHTYPDYEESPREYILSLIQTILKTNSNVTDIFNSPINQLDEQVRLTIEAMR 286 Pseudobacteroid...
WP_014400160 213 RANLKKPQDKAGQAAIALAAGHHGEPVLPGTFVDYELKPREYELSVAQTILRVHTRVSDIFNDPMNQTAEQLRLTIEALK 292 Corallococcus c...
WP_095977199 218 KERLKKPQDKSGQAAIELSAGHHGEPTLPQTFVDYELRPREYELSVAQTILRVHTRVSDLYNDPMNQTQEQLRLTVEALR 297 Melittangium bo...
WP_093285501 211 RREALARSNEHGESVVDLRIVQGGEPQLPTTFVDYEEDPREYHLSTIQTVLRTHTRVTDLYSNKIDQLKEQVRLTVESVN 290 Verrucomicrobiu...
WP_072717269 211 QSRLKSVVNVYGEEKIPVISDYQGEIELPASYIDYEIEPREYDLSLAQNILRVHTHVTDIYNEPIDQLREQIRLTVENLK 290 Planktothrix te...
WP_088256464 206 HLELKSTVNRYGERNIDLVSGFAENVEIPETFVDYSATPREYSLSAVQTVVRVHTRVSDLYNDPHDQLEEQMRLTVEGIK 285 Fimbriiglobus r...
Q0YUW9       212 YLKIRSTVNTHGEKHIDLVAGFAEDVEIPETYVDYTNKPREYSLQAIQTVVRVHTRVSDLYNEPYNQIEQQMRLTIEGIK 291 Chlorobium ferr...
WP_006283849 206 QLRLKASVNDNGEKHIDLLSGHEEDNVIPETYIDYEENPTEYSLNTLQTVVRVHTRVSDLYNNPYNQLEEQLRLSIESIK 285 Segatella
WP_038670087 208 KAEWSSKVNEHGEHKISIQAGHKGECILPETFVDYIEEPREYPLSIIQTVLKIHTRVTDLYNDPIDQLKEQVRLTVEAMK 287 Pelosinus sp. UFO1
WP_014133625 210 DAAATAAGRTAPEHPLDLTSGHHGEPYLPETFVDYEESPRAYELSIAQTVLKVHTRVw---------------------- 267 Kitasatospora
WP_036938402 287 ERQEWEILNNKDFGLLNNVCPSMKVHPKDSSPTPDDMDELLSRVwKKPAFFLAHPKAIAAFGRECTRRGVPPPTVNIYGS 366 Pseudobacteroid...
WP_014400160 293 ERKEWELINNPEFGLLHNADLKQRINTRSGPPTPDDMDELLTRR-RKTRYFLAHPRAIAAFGRECNKRGLYPTVVDVGGA 371 Corallococcus c...
WP_095977199 298 ERQEHELINNREFGLLHNADLKQRVIARRGPPTPDDLDELLSRR-RKSRFFLAHPRTIAAFGQECNRRGVYPTYVEVDGN 376 Melittangium bo...
WP_093285501 291 EWEEWELINNADFGLLNTVAPSQRIPTRSGPPTPDDLDELLSKVwKKPAFFLAHPKAIAAFGRECTRRGVPPPTVSLFGS 370 Verrucomicrobiu...
WP_072717269 291 ERQEWEIINNPNFGLLNSISPLMRVQPRYDVPTPDDLDELLTRVwKKPAFFLAHPRAIAAFGRECTRRGVPPVSINIFGA 370 Planktothrix te...
WP_088256464 286 ERQEWDLINSKKFGLLHSVDPAMRISTRYGAPTPDDLDELLALVwKKPAFFLAHPKAIAAFERECTWRGVPPVTMSLFGT 365 Fimbriiglobus r...
Q0YUW9       292 ERQEWEFINNREFGLLYSVDPGQRISTRYGTPTPDDLDDLLTKVwKKPAFFIAHPKAIAAFERECTWRGVPPATINLFGT 371 Chlorobium ferr...
WP_006283849 286 ERQEWELINNKKFGLLSAVNPAYRISARYGSPTPDDLDELLSLVwKEPAFFIAHPRAIAAFERECTWRGVPPVTTDLFGT 365 Segatella
WP_038670087 288 EQQEWELINNKDFGLLHSVAPSMRLQPRYGPPTPDDMDELLSRVwKKPALFLAHPKAIAAFGRECTKRGVPPATVTLHGS 367 Pelosinus sp. UFO1
WP_014133625 268 ---------------------------------------------KQPAFFLAHPRAIAAFGRECTRRGVPPQIVELFGS 302 Kitasatospora
WP_036938402 367 PFVTWRGVPIVPCDKLMVN-----GKcchnsyhGSTNILLLRAGEKEQGVIGLHQPGIPNETgIPSLSMKFAGIDQKGLS 441 Pseudobacteroid...
WP_014400160 372 KFQAWRGVPILPCDKLPIS-----RE-------NTTSIIAMRIGQDDQGVVGLHNAGIPDEV-EPSLTVKRMAVNDQAIT 438 Corallococcus c...
WP_095977199 377 KFIGWRGVPLLPSDKIPIG-----ND-------GTTSIIVMRTGKDDQGVVGLHQTGIPDEI-SPGLSARRMDVSDKAIT 443 Melittangium bo...
WP_093285501 371 PFLTWRGVPLVPSDKLLIDgrttpDDn-----lGTTSILLLRVGEAEQGVVGLQKAGVPGEV-EPGLSVRYMGTDENSIA 444 Verrucomicrobiu...
WP_072717269 371 PFITWRGVPLVPCDKLEIK-----GYngnlqgpGKTNILLVRVGEKEQGVVGLHKVGIPGEQ-LPSLSVRFMGIDSQSLA 444 Planktothrix te...
WP_088256464 366 PVILWRGVPIVPCDKLEVK-----SRyqsnqwlGTTSILLLRIGEAEQGVVGLHHAGIPGEI-MPSLSARLMGLDSLGVA 439 Fimbriiglobus r...
Q0YUW9       372 PVLTWRGVPLIPSDKLEIN-----KNnks--ghGTTNIILLRVGENEQGVVGLHQAGIPGEI-SPSLSARLMGLDKLGVA 443 Chlorobium ferr...
WP_006283849 366 KVILWRGVPLIPSDKVEVE-----GQyltgrgvGTTKIILVRTGEQNQGVIGLHQSGIPGEI-APSLSARLMGLDKFGVA 439 Segatella
WP_038670087 368 PFMTWRGVPIVPCNKLMVN-----GKaksgcyvGTTSILLMRLGEEEQGVVGLHQLGIPDEI-LPSLSLRTMGIDNKALT 441 Pelosinus sp. UFO1
WP_014133625 303 PFLTWRGVPLLPSDTLDLR-----GTads--apGTTNILLMRVGEDRQGVVGLRPAKVPDEA-EPGLSVRPMGVDRQAIT 374 Kitasatospora
WP_036938402 442 SYILSLYFSAAVLSSDAIGMLENVEVGK 469 Pseudobacteroides cellulosolvens
WP_014400160 439 NYLVSTYYSAAVLVPDALGVLENVALGG 466 Corallococcus coralloides
WP_095977199 444 SYLVSTYYSVAPLVPDALGVLENIQLGF 471 Melittangium boletus
WP_093285501 445 SHLVTRYFSASVLTDDAIARLDNVVVGR 472 Verrucomicrobium sp. GAS474
WP_072717269 445 SYLLTLYFSCAVLTDDAVAVLENVEVGY 472 Planktothrix tepida
WP_088256464 440 SYLLTLYFSCAVLTDDALGVLENVEVGY 467 Fimbriiglobus ruber
Q0YUW9       444 SYLLTLYSSLAVLTDDALAVLENVEVGY 471 Chlorobium ferrooxidans DSM 13031
WP_006283849 440 SYLLTKYFSLAALTDDAIAVLENVEVGY 467 Segatella
WP_038670087 442 SYLLTLYFSTAVLTDEALASLDNVEVGF 469 Pelosinus sp. UFO1
WP_014133625 375 SYLVTGYFSVAALVDDAIAVLQDVEVAH 402 Kitasatospora
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