Conserved Protein Domain Family
DUF5904

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pfam19261: DUF5904 
Domain of unknown function (DUF5904)
This family represents a domain of unknown function that is found in Phycodnaviridae. This entry is likely to represent membrane proteins with four transmembrane regions.
Statistics
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PSSM-Id: 437093
Aligned: 8 rows
Threshold Bit Score: 128.273
Created: 20-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
REF_WilhelmUTK:AaV_062         38 SKVKSEIQMSSIFIIFFISFIFIVTSSTAIGTYEKYCKDNKNKVDIDLNKFFIASLSASITVPVTLLLAKFGGSFrLTLF 117
2_pfamImport                    1 GKVDLEVSWGTVGGILLLGFFYMVTASIGIGVFSKCDSMKGKPVQENLNKYLAATLTIALTIPFTLLVTKLAKNE-AGVF 79 
1_pfamImport                    1 GKIDLEVSGLTVMGILFLGFFYMIISSIGMSIYSKCDAMKGQPIQENLNKYLAATLTIGLTIPFTLLMTKFVKNE-GVAF 79 
YP_004063469                   23 GKIDLEVSGKTVMGILFLGFIYMIISSIGMNIYSKCDAMKGQPVQENLNKYLAATLTIALTIPFTLLVTKFVKNE-GAVF 101
YP_004061926                   35 TRETLDISWNTIGIITLLGAMYMIAASIGINTFSKCEKFKGKTLQENLNKILVATLGIALAIPFTLSMTKMFSNE-MPVF 113
YP_004061463                  138 GKIETEIGYPQVGLTILLGIFFVAVTALGIDKYNKCEGIQDSEKYQNLKMFMSHTMAIAITIPVILLLQKFVSNE-GGVF 216
YP_009465755                   70 GKATLEMSYGAIGMVCFLAFAYMVISSIGIDTYMKCDTVKGQKTYDNLYKFLSHTLTIALTIPFTLFLGRMFKSD-LGLW 148
REF_CAMERA-phage:MPVG_00034T0  17 GSVDIELPAVSVLTIFVLALMYMVTTSISIDIYAGCD-VKGKKLYDRMASFMSHTLTIALAIPATLLLTKMFNND-TGAF 94 
REF_WilhelmUTK:AaV_062        118 TIIFSILGFVAAAATIHWSNNCKkmsKKEKNKRiAWSVGGAFSYILIIAFSIFLNTSN 175
2_pfamImport                   80 MLIYSLMGLVGAAAALNWTLKCP---DAKEAEK-GYSAFSVVLFTITLLASFYVMKPK 133
1_pfamImport                   80 ALIYSIMGLVGSAAALNWTTKCE---NAKQSEK-GFAGFSVFLFTSTLLISMFLMRPK 133
YP_004063469                  102 ALIYSIMGLVGSAAALNWAVKCE---NAKSSDK-NFAALTTAVYSLTLMFSFYLLRPK 155
YP_004061926                  114 LMTYAIMGVIGTSIALNWTVNCE---EAEKQST-TTIGVSLASFIATLMFGVFLIVPK 167
YP_004061463                  217 TIIYAIMGLTASAIAMDIMRQPEcedTVKKSDK-NFAIMSLVGWIILLLAGCFFTFKK 273
YP_009465755                  149 MSFFGLMGLVGASMVVSLTNKCP---NAKKSNR-QFSYFALPMFIMSCLAGAYMVTKK 202
REF_CAMERA-phage:MPVG_00034T0  95 MMLYGLAGVIVSLMANDLVRKCN---ITEQLKV-MWSRFSLGLYTIVFLIGIFLSAKK 148
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