Conserved Protein Domain Family
DUF5900

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pfam19253: DUF5900 
Family of unknown function (DUF5900)
This is a family of uncharacterized proteins of unknown function found in viruses. These proteins are thought to include F-box domain containing proteins, a conserved domain present in numerous proteins, involved in protein- protein interaction.
Statistics
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PSSM-Id: 437085
Aligned: 15 rows
Threshold Bit Score: 107.483
Created: 20-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
YP_009483352 463 RMSNGDICVVKWsRshQGVDGIASFTFSPTCSDTA-FAGRTIpAGVAWTCVAvPRSGPRRPYcpDDWVYWPTDGDSDASA 541
YP_009482654 357 SMTGGDRVYLA--HrpDLGQVITRLKIASNNGAEGpDTRVII-EGCEWTVIE---PAEDAAY--QGRVFYPADPRSRQFD 428
YP_008438157 328 NFHNNDQYVQA--VdgDGAPTILYYYIDSv------PRGQMI-ANCAWTVIA---PRSDSGY--SGSVFYPSDTTSPQFK 393
YP_009119369 339 RFHNGDQYVQV--SdgNGVPTILYYYIDSl------PRGQLI-GNCAWTIIA---AQPDAAY--GGAVFYPADVGSPQFE 404
YP_009119431 318 RFRNGDSYAEA--RdgDGPPTILYYYIDAa------PRGQMI-GNCEWTIVP---AERGAVY--TGSVFYPTDVKSSQFQ 383
YP_009120525 584 RWSNGDHANERW-Ya-GSLVGV-SFVISPASWPDSlLSGARV-EGIDWRIRK-HEPTPTCPF--DGYTYVPADTASPEFA 656
YP_009119919 203 DWPNGDYEISDWfHg-DIYMR--TYGIMTGDGTPI-----VL-DAQGWDVEK-HIPSPDCPY--DGHVYAPVP-GAKAFA 269
1_pfamImport   1 DWPNGDYAVTEW-Tg-CLMGKVISYGMANGAERVT------I-DAQHWTVER-HRPSVECAY--DGYVYAPSDVDSPAFA 68 
YP_009481345 440 GYPGGDWAIERW-Sn-GTLVGIDGFRIAPVADSDDlAEGAVL-DDCEWTCDRvRGGDAGVRY--DGHIYYPSDPATQAFA 514
YP_009430092 472 GYACGDWAIEQW-Td-GAFVGIERFRIAPVADVDDlAEGALL-ADCLWTCDRvRGGS-GARY--DGYIYHPTDPASPEFA 545
YP_009483352 542 LFDQYVRRRLI----GWDDEAI-EFWLNL 565
YP_009482654 429 QMAEYVLSGRSe--qAFGPAQQaAFVAAI 455
YP_008438157 394 MMADYVLSGRSa--eAFSPAQQaAFVDAI 420
YP_009119369 405 AMAHYVLSGRSa--eAFSPAQQaAFVAAI 431
YP_009119431 384 AMADYVLSGHSs--hAFSHAQHeAFARAI 410
YP_009120525 657 LFSAYILSGRSah-nGFCAARQrAFAAAI 684
YP_009119919 270 LWSHYILSGRSassgGYEPARQaAFVTLV 298
1_pfamImport  69 LWAHYILSGRSarpgGYAPERQaAFIALL 97 
YP_009481345 515 LFYDYMASEASa--rAFTEQQRdAFVWAM 541
YP_009430092 546 LFYAYMASEASe--rAFTPGQReAFMWAM 572
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