Conserved Protein Domain Family
Radical_SAM_2

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pfam19238: Radical_SAM_2 
Radical SAM-like domain
This family represents a set of radical SAM like domains that are often found associated with pfam04459.
Statistics
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PSSM-Id: 497863
Aligned: 84 rows
Threshold Bit Score: 232.74
Created: 20-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_106456044   72 KDYDENLGLEFENALFDGLIQCNNKCPFCFIDQQPPGKRDSLYLKDDDYRLSFLYGSYLTLTNLTAKEWERIEQMRLSPL 151 Aphanothece he...
EES52794       84 KDPDLSLGIVVDPP---PIRRCPNDCAFCFVDQMPAGARKTLYIRDEDYRYSFLYGNFITLTNLTEKDYLRILEQRLSPL 160
WP_143536841   65 KDIDDPLGVDLEEF---RIKTCGDDCVFCFVDQNPTGLRDTLYFRDGDFRMSFLYGNYITVTNLRERDLARIVEQRLSPL 141 Rubricoccus ma...
WP_046443175   64 KEPYEDLGIEFENDGFGKKISCKNKCVFCFVDQMPKKMRRTLYLKDDDWRMSFLMGSYITLTNLKEEEIQRIIDQRISPL 143 Christensenell...
WP_012808813   81 RESGEDWGVDFVDVLFDGIKTCVNACQFCFMAMLPEDMRPSLSIRDDDYRLSFLQGNFVTLTNLTDEDVERIISHKLEPM 160 Lancefieldella...
1_pfamImport    1 REEGEDWGFEFEGVVFDGVRQCRNACTFCFMRQLPDDMRSSLTLRDDDFRLSFLAGTFVTFTNLKPEDERRIVEQRISPL 80 
WP_012798111   82 REEGESWGITFDGAIFDGIRVCRNACMFCFMRMLPKESRDTLMLRDDDWRLSFLQGNFTTLTNLSEEDADEITERHVSPL 161 Slackia heliot...
WP_013177628   76 avAWEDPGLEFAEVIFDGLKKCANKCEFCYVHQMPKGFRKSLYIMDDDFRTSFLYGSFVTLTNLSEEDIARILDEHLSPL 155 Truepera radio...
jgi:Sgly_1694  71 KEPGEDLGIELGQVSAQGLKRCRNNCVFCFVRQMPQGLRKSLYDKDDDYRLSVTQGSYITLSNLTEKDFLRILRLHISPL 150
WP_007780254   68 KGPGEFLGLEVETVSAKGLKKCCNNCSFCFVAQMPKGMRSSLYDKDDDYRLSLTQGSFITLSNLSEEEITRITSLHLTPM 147 Desulfosporosi...
WP_106456044  152 YVSVHATEPDLRIRLLK-------NP-RAGKLLEQLKWFKERRLQIHAQVVVCPEINDGVHLERTLLDLANFsqedIPTV 223 Aphanothece he...
EES52794      161 YISVHATEPALRRQILK-------ND-RAQDVLPLLERLCNGGITLHTQVVLMPGINDGEALLRTWKDLSAL----YPRV 228
WP_143536841  142 YISVHCTHTPTRRAMMG-------HRtQNDQLMEKLRFLAANDIELHAQIVLVPGYNDAGRLVQTILELADL----HEHL 210 Rubricoccus ma...
WP_046443175  144 YVSVHAYDDEMRKLLFG-------NP-DAVKTFGIIERLAKNGIRMHTQIVMCEGLNDGKVLEETIEKLYEL----YPQI 211 Christensenell...
WP_012808813  161 NVSLHAISSDVRRNLIG--------P-HAARGIEVLKKLMDAGIEIHGQIVLCPNINDGEELDKTLDWVEA-----HQQI 226 Lancefieldella...
1_pfamImport   81 RLSLHVADPEVRRRMIG--------K-HAQHGIDVLERLLEAGIEFHAQIVLVPDQNDGAVLEDTLAWAYA-----RPGI 146
WP_012798111  162 RVSLHCISPEVRSKMIG--------R-HADHGVRMMEKLLAGGIELYMQIVLLPGVNDGAELMKTLAWAYL-----HEGI 227 Slackia heliot...
WP_013177628  156 YVSVHTVNEDLRRDMMKwwrlkvrDE-RATRIREMLQRLEP--IDLYTQMVLLPGRNDGEHLDETLEHLAT-----YDNV 227 Truepera radio...
jgi:Sgly_1694 151 YLSVHAWNPAARKKLMK-------NS-RAALLPEQIQRLVEGRITLHTQIVLVPGYNDGEILWDTVNHLAEL----YPSV 218
WP_007780254  148 YVSVHAWNPEVRTQLMR-------NP-QAGKLPEQFQRFAEAGIVVHAQIVLIPEHNDGDVLRETIERLGEL----YPSV 215 Desulfosporosi...
WP_106456044  224 ASA 226 Aphanothece hegewaldii
EES52794      229 ASL 231
WP_143536841  211 FSV 213 Rubricoccus marinus
WP_046443175  212 GSV 214 Christensenella hongkongensis
WP_012808813  227 TSL 229 Lancefieldella parvula
1_pfamImport  147 LDV 149
WP_012798111  228 ANV 230 Slackia heliotrinireducens
WP_013177628  228 QAV 230 Truepera radiovictrix
jgi:Sgly_1694 219 QSV 221
WP_007780254  216 QSI 218 Desulfosporosinus youngiae
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