Conserved Protein Domain Family
P9_TM
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pfam19066: P9_TM 
Minor capsid protein P9 transmembrane helices
This entry represents the N-terminal transmembrane helices of the minor capsid protein P9 found in PBCV-1 and related viruses. These transmembrane helices are inserted in the bilayer membrane of the virus vesicle structure. P9 plays a role in the stabilisation of the capsomers.
Links
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Statistics
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PSSM-Id: 497749
Aligned: 20 rows
Threshold Bit Score: 54.976
Created: 20-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
Q5UQD3                         40 FWIYDPMILFRDgnyLKIFPTKDMTQIQVLNALTRLCIYLAIIFVLVSAISGYAYVPIIFILIIIVIYF 108 Acanthamo...
1_pfamImport                    1 IWFKNLRVLFLRp--sEIIPSRDQSDAERVNAIVRLVFYCSLAVALIRSNPMYLVLGLAIVVIITLAFA 67 
YP_009325718                   11 IWFQDLSVIFKRp--sEIIPTRDQSDSERVNAIVRLVLYCSFAVALIRQNYLYAVLGLAMIAIISLAYA 77 
GAX84787                        5 IWYRDPTGFMSGdraSRILPEPHTGMDAQLNAIFRFSIYAAILISVYRRSLTPGIAILATVGLGTAAVH 73 
YP_010778238                    7 FWLDEPSVLYANsayMNIIPNSNMSREEQFNSITRFCIYAIILFIILDKSSLWIFIPVIVICFIIFINY 75 
2_pfamImport                    1 FWIHNPYVLLNKdtiFDLWPMAHMTREEKLNAISKFVIYSTSIGFFLSGNIKLLFTAIITLVMLIATYY 69 
REF_IGS:CeV_111                 5 VWLNDPRILLRKdkiMEIWPSQDMTAEEKVNAVSRLVIILVIIGFLLTLKVNIFLLGAATLGIVYLLYY 73 
YP_009174492                    1 ---MDPSEIFRTdqlLNFWPTGTQSAKERTASTVRFVLYASVIVYLINRDNRVFALAGLVLAILYYLYT 66 
REF_CAMERA-phage:MPVG_00127T0   3 VWFDNPQELIDHkkvLQFWPTNKQTAEERVNAASRFIIYAACFIYLIRRDPRIFVLAATVLGVLYVMYN 71 
YP_009465806                    3 TWFESPKELVRAdrvSQFWPNSSQHPADRVNAASRFIIYATCVLYLIRRDVRIFVLGATCLGVLYVMYR 71
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