Conserved Protein Domain Family
P-loop_TraG

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pfam19044: P-loop_TraG 
TraG P-loop domain
This entry represents the P-loop domain found in the TraG conjugation protein.
Statistics
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PSSM-Id: 497734
Aligned: 91 rows
Threshold Bit Score: 649.584
Created: 20-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_097132476  405 GIRLGDRLTGKPLHVDISDEPMKKGIITNRNKFILGPSGSGKSFLTNHFQRSYHEQETHAVIVDVGHSYKGLCELL---- 480 Pedobacter xix...
WP_015056736  411 GLLLTDR-FGRPCMVDPFFGPMERGIIANRNFMVIGPSGSGKSFSMNNLVYYLLAHGTHISLVDVGGSYKRLCTLM---- 485 Fibrella aestu...
jgi:Slin_6709 423 GVKLVERMSGKPLLVDLSDQPMNKGWVTNRNKFILGPSGSGKSFFTNHALRSFHVQGSHAVIVDVGHSYRGLCDML---- 498
WP_093831980  419 GIRLCERVYGKPIIVDLSDLPMDKGIITNRNKFVIGPSGSGKSFLTNHLVRSYLMMDSHVVIVDVGNSYLGLCQMM---- 494 Spirosoma endo...
WP_093831123  423 SIRVVDRLSGRPLWVDFSDEPMDRTWINNKNKFIIGPSGSGKSFLTNHFLRSYHTHGAHIVIVDVGDSYRGLCGML---- 498 Spirosoma endo...
WP_089334243  414 GIKLSDRLSGKPVQVDLSDEPMKKQIIFNRNKFILGPSGSGKSFFTNHMVRQYYEQGAHVLLVDTGNSYKGLCELK---- 489 Hymenobacter
WP_084443309  410 GIKLSDRISGKPVHVDLSDAPMKTGLITNRNKFILGPSGSGKSFFTNGMVRQYHEQGTHVLLVDTGNSYKGLCELK---- 485 Hymenobacter r...
WP_068227094  408 GIKLSDRISGKPVHVDLSDEPMKQGIIKNRNKFVLGPSGSGKSFFTNGMVRQYHEQGAHVLLVDTGNSYKGLCELK---- 483 Hymenobacter s...
WP_036868565  410 GIKMVDRLTGKPLHIDISDLPMKKGIITNRNKFILGPSGSGKSFFTNHMVRQYYEQGTHVLLVDTGNSYQGLCELIhrkt 489 Porphyromonas
WP_008564073  410 GIKMADR-SGKPIHLDISDLPMKKGITTNRNKFILGPSGSGKSFFTNHLLRQYWEQNTHIVLVDTGNSYQGLCEMIrhkt 488 Segatella macu...
WP_097132476  481 ---NGYYFTYSEDNPIRFNPFYLGEEdLLDTEKKESIKTMLLALWKKDDEKFTRAEYVALSNAITGFFDF-LEQ-----H 551 Pedobacter xix...
WP_015056736  486 ---GGRYITYEADNPIEFNPFYIKDL-NPDEETKDALANLLMALWKKDGEPATKAEEVTIANIVHEYYGA-MRHmhdtgD 560 Fibrella aestu...
jgi:Slin_6709 499 ---GGLYLTYSEEEPINFNPFFIENRlLPDVEKKEAIKVLLQTLWKRSDERQTMSEYTALSDAVTQYFETyLPN-----N 570
WP_093831980  495 ---KGKYLTYSREKPIHFNPFYIDGRrYPEEEKIEAIKGLITTLWKKENDPISMAEQTLIGECVFSYFRL-LDA-----D 565 Spirosoma endo...
WP_093831123  499 ---GGKYITYTMEEPIHFNPFFLEGRaFPETEKMESLKNLLLTLWKSIEEKTSRAEYNALSSAVKGYFLK-LQV-----D 569 Spirosoma endo...
WP_089334243  490 ---GGVYFTYEEDNPIAFNPFLVS-G-KLDVEKKESIKTLLQALWKKDDENVSQSEYVSLSTAVSLYYVM-LEE-----N 558 Hymenobacter
WP_084443309  486 ---GGVYFTYEEDNPISFNPFFVV-G-RPDVEKRESLKTLLVTLWKREDERVSQSEYVSLSTALTQYYGM-LEQ-----T 554 Hymenobacter r...
WP_068227094  484 ---GGVYFTYEEAKPISFNPFYVE-G-RPDVEKRKSLHTLILTLWKLADEKVTQSESVSISNAIAQYYQL-LEK-----E 552 Hymenobacter s...
WP_036868565  490 ggkDGVYFTYTEDNPISFNPFYTEDN-VFDIEKRESIKTLILTLWKQEHEKPTGAESVALSNAVSDFINL-ITQ-----D 562 Porphyromonas
WP_008564073  489 qgeDGVYFTYSDESPISFNPFYTTDK-VYDVEKRESIKTLLLTLWKKDNEPATRSEEVALSNAVSLFIER-IKA-----D 561 Segatella macu...
WP_097132476  552 PEVFPCFDSFYEFLKDHYIGVLQAENVKDRDFDINNFMYVLRPYYKGGEFDYLLNATENLDLLHERFIVFELDNIKDHPI 631 Pedobacter xix...
WP_015056736  561 DDSFPCFDTFYAFTRDTYPAIFARNMGSEREFNLNNFLYILRPFHADNQYGYLLNSRKNIDLMELPFVVYELDNIKDHPV 640 Fibrella aestu...
jgi:Slin_6709 571 PDTFPCFNSFYEFMQSDFPKYLAEHKVQVGYFDYDNFIYVLRPFYKGGEYEELLNSRANLDLLNIPFIVFELDNIKDHPI 650
WP_093831980  566 HNIEPCFNTFFEHINTGFKKILDDKKVNLRNFEFDSFRLCLEPYYMGGEYDYLLNSKTNLDLTNDRFVVFELDNIKDNKV 645 Spirosoma endo...
WP_093831123  570 ESIFPCFDTFYEFMQQDFNEYLKREGVRDDYFDYNNFMFNLKPYYKGGEFDFLLNSKKNLDLLHERFVVFELDNVKDHPI 649 Spirosoma endo...
WP_089334243  559 PAVKPSFNTFYDFVKGPYSEILREEKVREKDFDIDNFLYVLKPYYKGGEYDYLLNSPKELDLVNEPFIVFELDNIKDHPI 638 Hymenobacter
WP_084443309  555 PALRASFNTFYEFLQGPFKTYLATEKVRDQDFDLQNFLYVLRPFYRGGEYDYLLNSAKDLNLVQESFIVFELDNIKDHPI 634 Hymenobacter r...
WP_068227094  553 PGLPASFNTFYEFLSGPYRAHLDTEKVREKDFDIHNFLYVLAPYYRGGEYDYLLNSEKQLNLTKESFIVFELDNIKDHPI 632 Hymenobacter s...
WP_036868565  563 KSIVPSFNSFYEFIKNEYRNNLNEQNVREKDFDIDNFLFVLQPFYKGGEYDYLLNSDKELDLLNKRFIVFEVDAIKDNPV 642 Porphyromonas
WP_008564073  562 DGIVPSFNSFYEYLTTDYSALLREKKVREKDFDLANFLNVLEPYYKGGEYDYLLNSDKQLDLLNARFIVFEIDSIKDHPI 641 Segatella macu...
WP_097132476  632 LFPVVTIIIMQVFISKMRILKGIRKTILIEEAWKALMKEGFAEYIKYLFKTVRKFFGEAIVVTQDIEDIISSPIVKQAII 711 Pedobacter xix...
WP_015056736  641 LFPVTTIMIMNTYVRKLFSVRGVLKMLIIEEAWKALAKENFAQFLRWCSKTVRKHLGSLGVVTQEVDDLVGNAIVKDAII 720 Fibrella aestu...
jgi:Slin_6709 651 LFPVVTIIIMDTFISKMRKLNGVRKIILIEEAWKAIMKDGMAEYIKYLYKTVRKFFGEAWIVTQEVDDIIGNKIVKDSII 730
WP_093831980  646 LMPIITIIIMDTYITKLRTLEGIRKIMLIEEAWKAIMRPNMAEYILYLYKTVRKHFGEAWLVTQEVDDLTSSPIIKDTII 725 Spirosoma endo...
WP_093831123  650 LYPIVAIIVMDTFISKMRKLKGIKKIILIEEAWKAIMTPNMAGYIKYLYKTVRKFDGEAWIVTQEVDDIIGSSIVKDSII 729 Spirosoma endo...
WP_089334243  639 LFPVVTLIIMETFISKMRKLKGVRKMILIEEAWKALTTPGMAEYIKYLFKTVRKFFGEAIVVTQEVDDIIGNAIVKDAII 718 Hymenobacter
WP_084443309  635 LFPVVTLIIMDTFIAKMRTLKGIRKMILIEEAWKAIAKEGMAEYIKYLFKTVRKFFGEAIVVTQEVDDIIGNPIVKDTIL 714 Hymenobacter r...
WP_068227094  633 LFPVVTLIIMDTFLQKMRQLDGVRKMILIEEAWKALATANMAEYIKYLFKTVRKFFGEAIVVTQEIEDIIGNPIVKDTII 712 Hymenobacter s...
WP_036868565  643 LFPVVTIILMEVFINKMRRLKGIRKMLLLEEAWKAIAKDSMAHYLKYLFKTVRKYFGEAVVVTQEVDDIVHSPIVKESII 722 Porphyromonas
WP_008564073  642 LFPITTIIIMELFINKMRRLKGIRKVILIEEAWKAIASANMAGYIKYLYKTVRKFFGEAVVVTQEVDDIISSDIVKESII 721 Segatella macu...
WP_097132476  712 NNSDCKILLDQSKYQNKFELIQELLALTDKQKAMVLSVNKANDPT-KTYKEVFIGLGGTHSAVYRIEVSLEEYLAYTTEQ 790 Pedobacter xix...
WP_015056736  721 NNSPIKFLLDQSNYEKRFSEVMQTLSLSEKQANIILSINKGKDPNrPPYNDLALLLGD-YCKVYGVEVSRVAYGTFTTER 799 Fibrella aestu...
jgi:Slin_6709 731 NNADTKILLDQRKYRNKFSHVKDLLALTDKEKDLCLSLNRDLDPK-RKYKEVFISWGGQESKVYGVEVSTEEYLAYSTEQ 809
WP_093831980  726 NNAPTKILMDMREYANKFDKVQEFLSLTPKQKNLALSINRDNRPG--PIYKEFAVFQGDHCAVYGLEASAAEKYAFTTEQ 803 Spirosoma endo...
WP_093831123  730 NNADTKILMDQRKYENKFNAVKELLGLTNKEKDLILSMNRDNDPN-RMYKEFFVSWGGQRYRVYGLEVSRPEYYAFTTKE 808 Spirosoma endo...
WP_089334243  719 NNSDTKILLDQRKFILKFDQIQALLSLTEKEKAIILSINRDNKPErGRYTEVFISLGGVVSKVYSIEVSKEEYITYSTEE 798 Hymenobacter
WP_084443309  715 NNSDCKILLDQNKFLNRFEDIQKLMGLTDKEKAQVLSINLDNRPG-AKYKEVFISLGGRVSKVYGVEVSLEEYVTYTTEE 793 Hymenobacter r...
WP_068227094  713 NNSHCKIMLDMNDFLSRFDDIQRMMSLSDKEKDLVLSINRNNRPG-AKYNEVFITLGGRVSKVYGVEVSKEEYVTYTTEQ 791 Hymenobacter s...
WP_036868565  723 TNSDCKILLDQRKYMNKFDSIQAMLGLTDKEKAQILSINMANHPG-RKYKEVWIGLGGVQSAVYATEVSLEEYYAFTTEE 801 Porphyromonas
WP_008564073  722 NNSDCKILLDQRKYMNKFDQIQALLGLTDKERGQILSINQSNDAT-RSYKEVWIGLGGVQSAVYATEVSKAEYLTYTTEE 800 Segatella macu...
WP_097132476  791 TEKVTLMEYAER-FGGdIRKGIMAMADDL 818 Pedobacter xixiisoli
WP_015056736  800 SKVEEIDDLAKTkYGNdLESAVKGWARGE 828 Fibrella aestuarina
jgi:Slin_6709 810 TEKIRLEEKVAF-YCGnYDLALRDYADEV 837
WP_093831980  804 TQKKKITDRVLV-NGGdWDSAIRQQVAMD 831 Spirosoma endophyticum
WP_093831123  809 SEKLRVLKKVAS-NGGnFDIALKEVVAED 836 Spirosoma endophyticum
WP_089334243  799 SEKMRLFDKFKK-TAD-MPTAIKLVAAEL 825 Hymenobacter
WP_084443309  794 TEKMQLFQKVDA-GMD-MTSAIRAYASEL 820 Hymenobacter roseosalivarius
WP_068227094  792 TEKMQLFQKVND-GMD-ISSAIQAYADEL 818 Hymenobacter sp. PAMC 26628
WP_036868565  802 TEKLELFQLADR-LDGdLELAIKQLAESK 829 Porphyromonas
WP_008564073  801 TEKMRVLARAEQ-LGGnMELAVRQLAEEE 828 Segatella maculosa
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