Conserved Protein Domain Family
LPD39

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pfam18858: LPD39 
Large polyvalent protein associated domain 39
This is a predicted enzymatic alpha-helical domain that is associated with polyvalent proteins of phages and prophages.
Statistics
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PSSM-Id: 497583
Aligned: 17 rows
Threshold Bit Score: 166.042
Created: 20-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
YP_010078897                  3432 KIDATRDLTGDALTAAMPTLLHWTPGRFLLKRVAKDIPALGEYADIKLKMDTFRDEWHALTDKL---AQRWQKYRAKNAA 3508
YP_010655400                  2767 FSRQLTDAMAGPKSKGQYSLLALAPMDRMIEELSGNNVHAKEYLNLKRDMDAYRAEKHAKYDSI---AQKWLNLNVLHPK 2843
WP_092892202                  3560 IGQMLTDAMGGKSD--RYNILALMPGEPLFEELGKNLPSARKYVGMKHALSAMRNERQATAADV---MDEWRGFMSKNPK 3634 Roseicitreum antarcticum...
WP_139208176                  2711 MSNLLTDAMGR---NARFNVLSLVPGRALFTELAKNIPAAQDYIGLKERMDADRNKWQARAAEM---VDKWTAAARRSPT 2784 Paracoccus alcaliphilus...
WP_051693595                  3841 VRYAMTNAMDGAGG---FSSLSLIPGRALIAEMGRNIPAAQTYLALKEKMDTLRNEMHEKYSKT---TQEWRKLTKLGKE 3914 Thioclava dalianensis...
WP_085378489                  1671 WSDLLTDAMGR---STRWNVLSLVPGRPLFKELGRNLLAAQSYIAHKDEMDAQRTAWHARAADT---AQEWMKLRRKDAD 1744 Paracoccus contaminans...
WP_076533527                  3935 VSSILTDAMVGKGRDGEYNLLSLVPGRPLFMELGKRLVSARAYLRTKEEMDALRNAWHGRADAV---AQEWLDLRRKDPR 4011 Gemmobacter megaterium...
REF_CAMERA-phage:VPAG_00062T0 2117 SAVKRGLSKAPGIDALQKNKYAALTLRQISEIGAKKLPSLTGYVNSVNEMMVTQNVLAEDVADLtseVSDWAKK---NKE 2193
WP_088606140                   828 TAGVVAQAR---SEEIHPALLSAMTLRQIDQQYGKKLPALRPWIGSLMERGAAASRISAKADRV---ALQWEQSVK-SSA 900  Candidimonas nitroreducens...
WP_069105989                  2322 TVSNIKQRAGFKATDYLGLGLQSLGRRQIVDIYGDMLPM-TEYNRLVQQMEADKNEGGAEADQL---VTRWA-----KLP 2392 Acidovorax sp. RAC01...
YP_010078897                  3509 ENSQLMQIMHESTLAQADPSEKFesrlnga-----------dlkilrdKKTSSDEWQQANKKAMDESAREKEWTRLSAEF 3577
YP_010655400                  2844 ETKEMARIMHDATIAKTDPSEGFqtrvtkl------------dretvrKDPASEAGHRAAERIKADDARRAEHDPLQARF 2911
WP_092892202                  3635 SNTRLMELMHDATIAGLDPEAEF-------------------------EARPKRNNEPKAEYDRDIKGKQEEFKTLRQRW 3689 Roseicitreum antarcticum...
WP_139208176                  2785 ANMGLMDLMHDSTLAGIDPSKDGswrrpvdd----------qardmlkGKPSPAQNEWARITLNEAQEREAEWNRLREMY 2854 Paracoccus alcaliphilus...
WP_051693595                  3915 NMTALMDLMHDATIEGIDPSLPFiaksepr-----------dpwlvnrYGLQSKTGKEASERIASDETRRSGYALLKKRF 3983 Thioclava dalianensis...
WP_085378489                  1745 GNRAFMDLLHEATIAQVDPSNPF---------------------------EPRNVSMADPEGVAREAARARAHADLSARF 1797 Paracoccus contaminans...
WP_076533527                  4012 ANDDMMDLMHRATLAGVDPSKPLpsdhvwl-----------qrareelSRRGDSAEAWARATLEAAARKAEAHMELKRAY 4080 Gemmobacter megaterium...
REF_CAMERA-phage:VPAG_00062T0 2194 KAEQLFSMMHDATLGGVDPSKKFepmteileaeaarierrlrstggevNKDLTNRLNEVRDAIKNEPNRQREHARLREKY 2273
WP_088606140                   901 ERKALADVLLRESLAELNLNNTD-----------------------------------PKYIASLEPEQRAEYHTLRAKL 945  Candidimonas nitroreducens...
WP_069105989                  2393 DEGKLADLMHDATLAQIDPAKPY-----------------------------------------VEGDDKARYMSLQGRF 2431 Acidovorax sp. RAC01...
YP_010078897                  3578 QKLSPEGQALYRDVRDLYSKLANTQEAIIVANLEKAMEFRIKEAQRDFEDEMQAINDEGLKGEDRE 3643
YP_010655400                  2912 DALPPALKEQFKKVRDTYKDMTEELDAIMVQNLSDAIDIHGRKAERTYDREMQEIKDEGLTGQDRA 2977
WP_092892202                  3690 EVMPKPAQAIYRKVRGAYREAAYTERGIILDNVSKAMELNLKRAKQRYADDLERIKEDGLTGDVRE 3755 Roseicitre...
WP_139208176                  2855 DALPPTFQELYGEIRDEYTAMADAMDAALMDNIRASAKMVVRKADREHRKELQRIKDEGLTGEARA 2920 Paracoccus...
WP_051693595                  3984 DALPKEFQTLFSRVRRDYEHLNSDFQEAVEYNAKKAMEYSVKRAEREHAKMIDQIARDGLTGRAKA 4049 Thioclava ...
WP_085378489                  1798 KALPEGFRAMWGRVRGDYDAIGDAFEDAILKNIELASEIAVRRAQRDHAKALREIDDEGLTGAERD 1863 Paracoccus...
WP_076533527                  4081 DALPEPFKAMYGKVLAEYTAIADDFDKAVMENLQNATRIGLKRAERAFHKEARRIQDEGLTGQEKT 4146 Gemmobacte...
REF_CAMERA-phage:VPAG_00062T0 2274 SKIPADSKAYFKKMKNHYEEQRGRMREALEKSIERA-QVEESVKKEMLRTIRFD-NERAEKEIYFP 2337
WP_088606140                   946 ATLSPEAREIRTKAHEVLREQWSYTREALGKFISQT-VADPAMRAERLKGLDDLM--GRNRGNYFP 1008 Candidimon...
WP_069105989                  2432 KVLSDGAQKAYIDTRDAYQSHHEKVRSAIKERIERS-EIKGERKAALLKQMDDEFF-KAVKGVYFP 2495 Acidovorax...
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