Conserved Protein Domain Family
aGPT-Pplase3

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pfam18746: aGPT-Pplase3 
Alpha-glutamyl/putrescinyl thymine pyrophosphorylase clade 3
An alpha helical domain related to the alpha-helical DNA glycosylases, predicted to catalyze the in situ synthesis of hypermodified bases such as alpha-glutamyl, putrescinyl thymine, 5-(2-aminoethoxy)methyluridine or 5-(2-aminoethyl)uridine. The enzyme is predicted to utilize a high-energy pyrophosphate DNA base intermediate which is subject to a nucleophilic attack by the modifying moiety. Mainly found in bacterial mobile operons.
Statistics
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PSSM-Id: 497493
Aligned: 9 rows
Threshold Bit Score: 387.14
Created: 20-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_073137569  32 ENLVCLIEQIVDSIRRIKYIKLISGF-EISTINIDTNS-NLFDPIKGAIYHFNSGNFDEACWLIFLAIHFGKNKRTGWTL 109 Chryseolinea se...
WP_075628158  33 AERQACAEQLVSSMRRVDYVKDLATK-ALHPNRADPAS-EIFDPLMAAALATRQGNYDEAWWLSFLATHFGKHINDGWRL 110 Xaviernesmea or...
ODR98051      23 RARKTLAMQMIASLRRLEYTAILKGR-DIHPDRADPSD-PLFDPERAAIFHARGDDVDEAIWLVFLSIHLGQHREHGWKR 100
WP_072339043  34 VALDTLAVQFVASLRREDYYKLVQRK-AVAPRRADPND-AGFDAERAVAYHMQNGDVEEAAWLIFLMTHLARPADTGWLR 111 Devosia enhydra
Q1YFG7        32 ATIETLALQFVASQRREDYYKHVQAK-PVSAARAAPNS-PAFDAERAVAHHMQQGDIDEAGWLIFLMTHFARPVGSNWLR 109 Aurantimonas ma...
WP_047006856  34 AARDTLAMQIVASLRREEYYQVIQRRgPISPRRADPHH-DSFEAELGVVHFIQQNAYDEAAWLIFLMVHLGKPATDGWRR 112 Aurantiacibacte...
WP_047007328  35 ASRDTLALQLVASVRRERYFELLQERgAIPAFRANPHD-DRFEAELGLVHLLQRGQIDEAAWLVFLMTVFGKPAGSGWKR 113 Aurantiacibacte...
WP_012392032  38 ATKDTFIAQLVDSDRRRRFTLHVATSdPHPKVLGEPL--SAFDPHYAAVRCVRDGDFDEACWLVFLATHFGFHRHNRWAL 115 Mycobacterium m...
WP_008992685  47 NDIDEFVTIISDSIKKVSWI--IESK-PVDFQFNPQAIsEEYFPYGWVKHLLAKNDSDEACWLLFLISYVGYNSKSKWNL 123 Galbibacter mar...
WP_073137569 110 ARLVYAGGKKRPYWTWKKITKNTNEFLIWLNSNAPALkeNG---SFGNHRKYESCNAYKGrgtGSAIISYIEWVGPDLNH 186 Chryseolinea se...
WP_075628158 111 TKDFYGAFGTRAAWSWATISNNVADLHSWLDQQWPDLlnDGvsrRFSNHRKYESKSPAQM---KAVLGSYIDFISTFGSH 187 Xaviernesmea or...
ODR98051     101 LRDVYSGLGTG-TWTWQRASVDPDAFRKWLEKNH-----SRiggAFGNHRKYETLNPASKsstANVIQSFVDLVSP--SP 172
WP_072339043 112 LRHIYGKLGQG-IWTWQTVAADPQSFVDWLAANW-----TCiggKFGNHRKYESLDPNSNrpfGKVLATYLEWIGA-AGH 184 Devosia enhydra
Q1YFG7       110 LQDVYGRLGNG-RWDWATVTANPAAFYNWLDANW-----QQirgKFGNHRKYTSLRPNAPipmRKTVADYLAWIGP-AGH 182 Aurantimonas ma...
WP_047006856 113 LRDIYGKLGQG-RWDWAAGSTNPAAFEQWLAANW-----QSirgKFGNHRKYESLDPSKQramGPAVVDYVNWVNAAGGH 186 Aurantiacibacte...
WP_047007328 114 LRDVYGRLGTA-RADWNSMQAQPDLLETWLARHW-----QEvggDQGGHRRYESMRPDSRrpiGRAITQYANWIGCAGGH 187 Aurantiacibacte...
WP_012392032 116 SGNFYRRLDAGQPWTWETVSAQPAALRAWLDSNRTAL--RSaggPFGNHRKYESLAGNTQtgtGEAIESYVEWVGS--SH 191 Mycobacterium m...
WP_008992685 124 LKGIYTALDAQEIWSWERINGNVKDFQNWLIKNQVLLyqNG---NLGDNYKHPVMDMHKAttmAKDIENYVFYMAEFSNH 200 Galbibacter mar...
WP_073137569 187 NAKFEKFYLVAPNDPRGVFDQLFNSLSQVITFGRTAKFDYLTMLGKLGFIKCVPGRAYLQDATGPLRGARLLFGGSTD-A 265 Chryseolinea se...
WP_075628158 188 QALVQDIHRAVGQHPHAGFDELYKRMRAVKRFGRLGTFDFLTMLGKLGIAPIEPGSAYLADATGPLRGTKLFVHGDPE-A 266 Xaviernesmea or...
ODR98051     173 SGYFSALARAVGNDPKTIFDVAYRTLQ-IKRFGRLAKFDFLCLLGRLDLAPLEPGSAYLRGATGPLKGARLLVDRNRS-S 250
WP_072339043 185 KVFFAEEVRKAGNEPGIIFDHLYSSMT-VLSFGRLAKFDYLALIGRYGIAPIHAGQAYFKGATGPARGARLLFDGSAD-S 262 Devosia enhydra
Q1YFG7       183 TAFFANVVRAAGNDPHVIFDHLYNQMR-IGTFARLGKFDYLSLIGRYGVAPIEAGSAYLKGATGPEAGARLLVDGSRK-S 260 Aurantimonas ma...
WP_047006856 187 QALFSQIILTAGNDPNVIFDAFYKALP-VKGYGRLGRFDWTTMLSRYGFAPAEAGSAYLKTATGPKAGMRLLFAGNAN-S 264 Aurantiacibacte...
WP_047007328 188 EAKFAQLVREAGNSREAIFDEFFRALP-CVGFARLGRFDWVSMLDRYGIVHATPGSAYLRGSTGPLRGASLLFTGSTKaP 266 Aurantiacibacte...
WP_012392032 192 RAHFDDLC--AARSAQKSFAAAYASMADVARFGRTARFDYLTMLGKLGIVDLLPDKLYLQGSTGPLNAARLLVSGSTG-A 268 Mycobacterium m...
WP_008992685 201 AEFFANANTQFNSQPDLKFNYLLSSLNKNLRSNNLVHYNYLNLIDFLDITELSPNSFYLNDSSFVKRSAKLLMLGKNKiQ 280 Galbibacter mar...
WP_073137569 266 PIGADELEMLISDLEKDLDLfyGMQVIEDSLCNWQKKPDLFEHFSG 311 Chryseolinea serpens
WP_075628158 267 DADPTELEEILDQLDAQLQV--GKQVLEDALCNWQKTPDRFVLFRG 310 Xaviernesmea oryzae
ODR98051     251 TTPSDDLEAILQRLDSVLSV--GMQVMEDALCNWQKSPQRFKHFRG 294
WP_072339043 263 STGPEALQDLVDELDGVLGV--GMHVMEDALCNWQKSPTNFVHFKG 306 Devosia enhydra
Q1YFG7       261 ATPLSSIQGKLDALDLRLKV--GMVIMEDALCNWQKSPDNFVHYLG 304 Aurantimonas manganoxydans SI85-9A1
WP_047006856 265 GTGYVPLQQWLDELDTTLQV--GMEVLEDAICNWQKSPTAFVHFKG 308 Aurantiacibacter gangjinensis
WP_047007328 267 ARLTASFEKWLLELDGRVEV--GMKVWEDALCNWQKHPAHFVHYKG 310 Aurantiacibacter gangjinensis
WP_012392032 269 KTSAAELEDYLYDLGDHLGV--TFDILEDGLCNWQKSPSRFISFRG 312 Mycobacterium marinum
WP_008992685 281 KVSLPDLDKALLLLSGYIHDqyGNYILHLALGKWGK--ERIWNKKV 324 Galbibacter marinus
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