Conserved Protein Domain Family
HEPN_Apea

?
pfam18739: HEPN_Apea 
Apea-like HEPN
Apea-like HEPN nuclease. In epsilonproteobacteria embedded in R-M operons.
Statistics
?
PSSM-Id: 497488
Aligned: 60 rows
Threshold Bit Score: 40.5363
Created: 19-Feb-2025
Updated: 28-Apr-2025
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
WP_071060838 292 VEYMRILDGY---HTRISGD------EVIKGKIKatlkastkeikkliftdegRPLFEdTIQSVIPEWKyTSKHMEDIAg 362 Andreesenia ang...
WP_010076542 291 VQYVKILEGY---HLRITEE------EQVASTIEkdiknm-------iftddgKRLFTpIFEKA--EWSfNTKHAKAVAt 352 Clostridium cel...
ROT18523     316 LIVVQALEGF---WWRFRDSs-------------------------------------------YREQNnISRRDRGT-- 347
WP_009125439 134 LIVVQALEGF-------------------------------------------------------------CTRFRTEA- 151 Bacteroides fluxus
WP_012440304 327 ILYATQLESI---NLTLSAK--------------------------------------------------NEDKYIGPI- 352 Erwinia tasmani...
WP_015946861 323 VLYASQLEWI---SDQIGAG--------------------------------------------------YNQRYEDPI- 348 Desulfatibacill...
WP_068898795 286 MSHVILLDRYcslIAENTGFrlaswdTNDLKAQL-------------------DEEVEkYAEGTYRDKRqCVNKIIKHV- 345 Veronia pacifica
WP_012933489 301 LTLYTAMEAY---AKE---------------------------------------------------------------- 313 Conexibacter wo...
WP_009788082 309 LSLVQVIEGY---HK-------------------------------------------------IVINPrNKSILKHRI- 335 Lyngbya sp. PCC...
WP_006863592 410 LAAMQLIEGY---SQAYADE------KKEIEDFEkw---------------kaDFLLKlDRMENIKEE--DIEIIRDGL- 462 Marvinbryantia ...
WP_071060838 363 wiaaGFL-AKT--SLSHRMQELDDQHLqiirknaah-ieklrrddsIIGAKqdeeLIQL--YFKELGDTRNYYSHYKLDK 436 Andreesenia ang...
WP_010076542 353 wiagGFL-GKV--GLAERLKLLDDEYFniiannaidiiklehrdnaSEIEDneqeIKSK--FYRKIVATRNYYSHYKLNK 427 Clostridium cel...
ROT18523     348 -------------NLNTIITQLIGEFD-------------------SVGSR----LKLNeiNIPAVVDSRHYYSHFMPKS 391
WP_009125439 152 -------------SLTKMLEAIISEFS--------------------DIDK----LKNDniKIKQVVDSRHYYSHFMNKS 194 Bacteroides fluxus
WP_012440304 353 -----NKyASI--DLKNKLEAIFSKF-----------------------------NKKT--IGENITIVRGELAHVGRPK 394 Erwinia tasmani...
WP_015946861 349 --------AEF--GGEAVLSAISKVLE----------------------------TSDIkgIGQQISDIRNEIVHLKREK 390 Desulfatibacill...
WP_068898795 346 ----KAAkREP--NFSQKYENAMKYVS-------------------SDVKKliafSEDD---FDLMKTIRDQVSHGSQVK 397 Veronia pacifica
WP_012933489 314 ----RHGrNQV--RLLRQFAGVSQTATg---------------------------CTDE--ALRLIGASRRYFAHLGTQP 358 Conexibacter wo...
WP_009788082 336 --------ADFlkRYKHYCYNLFKSSA-------------------MIIQK----NEDD--FAELIKDTRNYYSHLGTQN 382 Lyngbya sp. PCC...
WP_006863592 463 ----GFSgISFrkAVKEFFYAGSSCIEt-------------------MSKTaffqKHNT--LIDNIVNDRNFYTHSSNRI 517 Marvinbryantia ...
WP_071060838 437 t---GVLESVQMSDTINVLKATIISIFMSHMDIETDL 470 Andreesenia angusta
WP_010076542 428 d---NVLNFIQMCKTINVLKALILMILYSHMGMKLDD 461 Clostridium cellulovorans
ROT18523     392 kk-pNALDGLELYHLTSQLRKLLVCCMLdfmgfsrde 427
WP_009125439 195 kk-pNTLDGWELYNLTFNLRKLLICCILKFIGFNNTQ 230 Bacteroides fluxus
WP_012440304 395 kl-mKVMSIDDYIKIGLYLKITITAHLLSQLGLTKEQ 430 Erwinia tasmaniensis
WP_015946861 391 kl-tNSLSIREIARLSMCLQITVIGYFLKDLQVSKEL 426 Desulfatibacillum aliphaticivorans
WP_068898795 398 tk-ePSSIRHEMIRKDRLLVLLL-YLVFDELGFTRQQ 432 Veronia pacifica
WP_012933489 359 ngptVDEIEANVVLSTRRASALMQACLLRELRFSTGE 395 Conexibacter woesei
WP_009788082 383 k---TLLSQEQILECRDTLKLLFRVCLLEKLDFDYQD 416 Lyngbya sp. PCC 8106
WP_006863592 518 t---VRLDFNEMINVATICKELFRVLVLNDMGIAQSV 551 Marvinbryantia formatexigens
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap