2FUT


Conserved Protein Domain Family
HepII_C

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pfam18675: HepII_C (497435 is an unknown moldel)
Heparinase II C-terminal domain
Heparinase II (HepII) is an 85-kDa dimeric enzyme that depolymerizes both heparin and heparan sulfate glycosaminoglycans. The protein is composed of three domains: an N-terminal alpha-helical domain, a central two-layered beta-sheet domain, and a C-terminal domain forming a two-layered beta-sheet. The C-terminal domain contains nine beta-strands packed together in a manner resembling a beta-barrel.
Statistics
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PSSM-Id: 497435
Aligned: 4 rows
Threshold Bit Score: 146.879
Created: 22-Aug-2024
Updated: 4-Dec-2024
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2FUT_A        662 RIDGDKVVGVQLADRIVTFSKTSETVDRPFGFSVVG-KGTFKFVXTDLLPGTWQVLKDGKILYPALSAKGDDGALYFEGT 740  Pedobacter he...
WP_036655504  985 MVDSGDMVGAKIADRVALFSKSGDRLNGTVTLNISGdEDHLQYVVTDLVAGYWTVERDGQTADSQLLVSEEGGVLSFNGP 1064 Paenibacillus...
CDA76427      685 LLKGENLVGAVIADRIVTFSKNGETINGKAEMDVQG-NGTFKFVMTDMKPGTWQVKKDGKIFIPYKWVGTEDGVLSFEGG 763 
WP_052755635  848 AIDSALLAGVKIQDRVVLFSKSGLPLGGTVTVELPAqSASMQVLVTDLQAGSWTVIKRGTDGPIEDEVSDGGGTLYFVAN 927  Janthinobacte...
2FUT_A        741 EGT-YRFLR 748  Pedobacter heparinus
WP_036655504 1065 PGT-YKLTW 1072 Paenibacillus wynnii
CDA76427      764 SGH-YEFFR 771 
WP_052755635  928 GGGvYDLQR 936  Janthinobacterium sp. KBS0711
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