8YY1


Conserved Protein Domain Family
V_ATPase_I_N

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pfam18670: V_ATPase_I_N 
V-type ATPase subunit I, N-terminal domain
Vacuolar H+-ATPase (V-ATPase) is a ubiquitous multi-subunit proton pump that acidifies a wide variety of intracellular compartments, which in turn affects many biological processes, including membrane trafficking, protein degradation and coupled transport of small molecules and pH homeostasis. Subunit 'a' of V0 (the functional domain responsible for proton transport) sector is highly conserved across eukaryotic species and exists in multiple isoforms. It is the largest subunit of V-ATPases and partitioned almost equally into an N-terminal cytosolic domain and a C-terminal integral membrane. Structure analysis of the N-terminal cytosolic domain from the Meiothermus ruber subunit 'I' homolog of subunit a shows that it is composed of a curved long central alpha-helix bundle capped on both ends by two lobes with similar alpha/beta architecture.
Statistics
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PSSM-Id: 497432
Aligned: 13 rows
Threshold Bit Score: 109.388
Created: 19-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
8YY1_N                 116 QAYLEPLERLAALAHGLDKSPFLRVIPFLLTEKE-LPLVEEALRKALEDRYLLAHEAYAGGVAALVVVHRKEVDQAKAAL 194 Therm...
PRJNA272727:SU48_02045 111 AAYGPAVRALSHIVGGLDRSRRVSLVPFLLQPTDnVAELDAALQGSLKDRYLLATEPVGQNRVGVIATLRGERDAARTAL 190
PRJNA272874:SY84_08485 111 SAYGDAVRALGRMAGSLDRSQRVSLLPFVLQATDnSGELDAALKAELADRYVLATETVGANRVGLIATRRSERDLARAAL 190
WP_011531172           115 AAYGDAVRALARLGGGLDHSRRLSLVPFVLQPSDqLDELEAALKTALPDRYALATETVGANRVGLIAVLRADRDAARAAL 194 Deino...
WP_012692017           115 RAYGDVVRALARMVGGLSRSRRVALVPFLLSPADnASELDAALREALADRYEMAMESVGANRVGVIATLRGERDAARAAL 194 Deino...
Q9RWH3                 115 RTYGDAVRALARMVGTLDRSRRVALVPFLIGATEnLGELDGALRESLGDRYTVASEVVGANRVGVIATLSADRDAARAAL 194 Deino...
jgi:Deipe_2353         112 RTYGDVVRALAELASGLDRSRRMAVLPFVLPKNEgVGELERVLRQDLEERFALDTRVVGNVTAGVVVALARERDKARAAL 191
Q5SIT6                 116 QAYLEPLERLAALAHGLDKSPFLRVIPFLLTEKE-LPLVEEALRKALEDRYLLAHEAYAGGVAALVVVHRKEVDQAKAAL 194 Therm...
jgi:Trad_2023          115 NTYLPPFRELAPTLAQLEGSRYLRGAAFLVPSEDfLSRVRAALKETFDNRFALATRRYGKGFLAVVAVLKGELSELQALL 194
WP_013704387           116 DQFQKPVEALAELAHGLDESRWLAVIPFQLEKEEeLGAVERALEEALEGRAVVAAEPVAGRLAVVVVVLKRDLEAARSAL 195 Marin...
WP_013458090           116 DLYQQPVETLAEMAHGLDTSRWLAVLPFLLEKESeLEVAAEALGEALEDRYVLAHQPLDGRVAALAVVLQGDLETARGAL 195 Ocean...
WP_013157910           112 QLFGSVAERLAGLTHGLDQSQRLAVIPFLVSKIEeLEPVRAALQASLEDRFLLESEALPNQIAAVVVVLRRDLEAARTAL 191 Allom...
jgi:Deipr_0227         114 AAYAEPAATLARMVGSLDRSRRVAVIPFLLHAETnLGELQASLNEALGDRYELAVESSGTGRVGAVATLAGERDLARTAL 193
8YY1_N                 195 SRAGVAELRL 204 Thermus thermophilus HB8
PRJNA272727:SU48_02045 191 GKVRLGELRL 200
PRJNA272874:SY84_08485 191 GKVRLGELRL 200
WP_011531172           195 SRARLGELRL 204 Deinococcus geothermalis
WP_012692017           195 SRVRLGELRL 204 Deinococcus deserti
Q9RWH3                 195 SKARLGELRL 204 Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539
jgi:Deipe_2353         192 GKARIGELRL 201
Q5SIT6                 195 SRAGVAELRL 204 Thermus thermophilus HB8
jgi:Trad_2023          195 SRLGLAELQL 204
WP_013704387           196 SRLGIGELRL 205 Marinithermus hydrothermalis
WP_013458090           196 SRKGIGELRL 205 Oceanithermus profundus
WP_013157910           192 SRQGLAELRF 201 Allomeiothermus silvanus
jgi:Deipr_0227         194 GRVRLAEMRL 203
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