Conserved Protein Domain Family
YDG

?
pfam18657: YDG 
YDG domain
This presumed domain is found in a wide variety of bacterial cell surface proteins. This domain has a highly conserved YDG motif near its N-terminus. This domain is likely related to the pfam17883 domain.
Statistics
?
PSSM-Id: 497421
Aligned: 42 rows
Threshold Bit Score: 32.7879
Created: 19-Feb-2025
Updated: 28-Apr-2025
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
WP_007050683         680 AKKeltVTGI---DITT-APTKVYDGT--NTiskASLDAVSVTE-VSG---LLA----E-DQISAssvksakstgltiKA 744  Anaero...
Q6AN25              1627 IPV---NLTI----TTD-AVSKTYDGS-------FNASGQAAV--ASG---TLF----DtDSI---------------SG 1667 Desulf...
WP_013446409        1295 GKR---AITL---TAVA--DTKTYDGT--TV----STAIPTVGTlATG------------DAINV--------------A 1334 Paludi...
WP_013633444        1806 ITK---TINV----TAQ-ADSRVYNGT--TT----SSVAPVVSAlQTG------------DVISV--------------Q 1845 Pseudo...
IGS:N510_002368      107 VPA---PLTI---TGLGgSHSKEYNGS-------ADCDGTGLEIeFEG---SFN----N-DDVAIk-----------tIG 154 
EOS78055             635 TRV---PITInldKELK-AESREYDGT--PG---VKMLGIE----FKG---ILP----G-DEGEVe------------LK 681 
goetting:Awo_c11660 1000 TPK---ALTV---SGVSvTTSKEYDGS--ISaavTNAGTLNPSDvIGS------------DAVSL-------------TS 1046
WP_014430025        2728 TAK---TLTV---SGLGvASSKVYDGSlsAT---VVGSGSLLSAqAPGsgsSSDgkpySgDTIAL--------------T 2784 Rubriv...
WP_050739826         125 DLK---TMNF---ITKK-PIAKVYDGT--KN---VPINLIEGLTnAGVaeeDVN------DVIf--------------DF 172  Acetob...
16_pfamImport          1 SKK-----SVt--AIVT-AEDKPYDTN--TN---ATVHAVVEEGvLSG------------DEIII-------------TG 42  
WP_007050683         745 TA--GTYDNKNA-GE-NKNYTITK--FSL-SGDKAA--NYTI--APYIA 782  Anaerofustis stercorihominis
Q6AN25              1668 GT--FAFTNANA-GIgNKVVTVSD--VTVtDGNGGS--NYLVnyAKNST 1709 Desulfotalea psychrophila
WP_013446409        1335 PT--QTFDNAAV-GT-THVLTASG--LTIkNGNTDVtsNYDI--SYVPA 1375 Paludibacter propionicigenes
WP_013633444        1846 PI--QIYNNRNV-GS-NKTLIPSG--LIInDGNNGA--NYTVn-YVNNT 1885 Pseudopedobacter saltans
IGS:N510_002368      155 GT--YSYNSVNS-GV-GQEIVLSGasYEL-EGEKAG--NYYI---TDNM 193 
EOS78055             682 TR--GIVESANV-GT-YTEVTLAN--LEL-TGKKGG--NYKV--DLDGE 719 
goetting:Awo_c11660 1047 TT--ASYDSAVV-GT-GKTITVN---YTL-TNP-----NYTV-----QP 1077
WP_014430025        2785 GTatGSYNAASVaGA--NTVSFGG--LTL-SGAQAG--DYVLslGSQAA 2826 Rubrivivax gelatinosus
WP_050739826         173 TS--AEFYSKDViFPgTNKVILKD--LTI-SGTKAY--NYVI--AAPAE 212  Acetobacterium bakii
16_pfamImport         43 LT--GTFDSAGA-GV-DKTVKVDTskATI-TGKNSE--HYAVs-YSSTT 83  
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap