5KDV


Conserved Protein Domain Family
IMPa_helical

?
pfam18642: IMPa_helical (This model is not part of the current CDD release)
Immunomodulating metalloprotease helical domain
IMPa is an immunomodulator metalloprotease that belongs to the peptidase M60 family pfam13402. This entry represents the helical domain found at the N-terminal of the Ig domain.
Statistics
?
PSSM-Id: 523388
Aligned: 13 rows
Threshold Bit Score: 135.178
Created: 19-Feb-2025
Updated: 28-Apr-2025
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
5KDV_A        264 PALVQQIVDGSWrtDYDWSKCTSyvgrtTCDd-------vPGL-SDFSKRVDVLKGALDAYNQKAQNLFALP-GTTSLRL 334  Pseudomonas a...
WP_012154160  400 QLWLTLFDSERV--DFNLANCAS-----SCD---------AKFnDVYRPALATIRSNIQALETNKLDIFNQA-DYSLYKL 462  Shewanella pe...
WP_011758513  390 DRLLANLGSGNFd-TALLANCGGnf--lSCDe--------EGFvDAFKAGADWLRGAAITLDNMGQDALALS-GADTLHA 457  Shewanella am...
Q8EJM3        388 KKLLTNLREQRFd-TQVLNDCTGny--lSCNs--------GAFvEAFKAGADWYRSSAETLDSNGIDVFSRT-NFPLMKA 455  Shewanella on...
WP_008484773  381 QRLTQHFIDQDF--AFDWSGCTSyvgkvSCDq-------vAGFdQAFLSGARSLKNALNRLDSQGLDLFAEP-NLTLLKL 450  Gallaecimonas...
Q9I5W4        304 PALVQQIVDGSWrtDYDWSKCTSyvgrtTCDd-------vPGL-SDFSKRVDVLKGALDAYNQKAQNLFALP-GTTSLRL 374  Pseudomonas a...
KXS18284      407 STLLTRLETGNF--SSNWSGCAVnvarnFCSa-------dATFmAEFGNPAANIRNAIRALDQSNTAIFRNSsRYRMERM 477 
KQV53712      365 QALLNRLNKNSF--STSWSGCTKdg-riDCSk-------dSAYmAEFGNPVSDVQEMIQSLDDPDAPLFAQA-GYQMEKL 433 
WP_002710257  515 QSMLQHFKARDY--AFDWSACDDd----NCGs-------vSGLdSEFQQGADAVRAMMNALDSSKTNLFADK-GFRLQKL 580  Thiothrix nivea
Q2SHR7        441 KTMLTHFESEDY--AFDWSACDGe----NCSa-------vSGLnAGFFEGADQVRNIMSNLDKNKTNIFADE-GKRYQKL 506  Hahella cheju...
Q87QZ6        314 QALLSRFETQNF--NVDLSQCDDk----SCPe-------aANMdSQFYDAANSIRQWLKSLDEQKISLFEQD-GYQYEKL 379  Vibrio paraha...
WP_052829571  474 KTMVSHFRDQSF--TSDLSQCDS-----SCSn-------vDSFkTEFQDAATLVRNMANGLDSNKTDLFSLE-GYKYQKL 538  Photobacteriu...
EIJ36379      434 IALVHSLETGLPdfNYEAGDCLNnigtvSCDlnkvtdaagNSVaQLFNDGASAIRSRLLEWDSSGIDVFSLGsEYDLFKL 513 
5KDV_A        335 WLLWADAVRQNIRYPMDK-AADTARFQETFVADAIVGYVRE 374  Pseudomonas aeruginosa PAO1
WP_012154160  463 LIILGDNYRQQIQYPMDVaTTDSLSYLKAYFADHSVYNFRD 503  Shewanella pealeana
WP_011758513  458 AVLLADKYRAAIDYPIGW--EEPQSWQQAMFADWLVNYART 496  Shewanella amazonensis
Q8EJM3        456 GLLLADKYRSEIDYPIAY--SEFTQWQQALFADWTVSYARA 494  Shewanella oneidensis
WP_008484773  451 FVLLGDSYRAQIHYPMDKeSTDPNQFLAAYLADHLAYYHRA 491  Gallaecimonas xiamenensis
Q9I5W4        375 WLLWADAVRQNIRYPMDK-AADTARFQETFVADAIVGYVRE 414  Pseudomonas aeruginosa PAO1
KXS18284      478 LILLGDKYRENITYPLSK-TANATAWYRAYFADHVAYIHRD 517 
KQV53712      434 LVLLGDKYRAALSYPMTR-TDNRQDFFRGLFSDMTVMNNRS 473 
WP_002710257  581 LALLGDSYRQSIHFPMDKlITDDTELMQAYFADHAVYNYRL 621  Thiothrix nivea
Q2SHR7        507 LALLGDHYRASVTYPMDKiTTEDNAFLKSLYADYSVYNYRA 547  Hahella chejuensis KCTC 2396
Q87QZ6        380 MVLLADHYRQTASFPMDKqSTGTTEFLKSYFADYVQYNSRR 420  Vibrio parahaemolyticus
WP_052829571  539 LILLADYFRQSVSFPMDMaSSDTTRFLEAYYADHVQYNYRD 579  Photobacterium gaetbulicola
EIJ36379      514 AVLAGDKYRANIQYPMDKiATDDTAFYQALFADFTVHYSRE 554 
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap