Conserved Protein Domain Family
HTH_SUN2

?
pfam18580: HTH_SUN2 (This model is not part of the current CDD release)
SUN2 helix-turn-helix domain
LINC complexes are formed by coupling of KASH (Klarsicht, ANC-1, and Syne/Nesprin Homology) and SUN (Sad1 and UNC-84) proteins from the inner and outer nuclear membranes (INM and ONM, respectively). the formation of LINC complexes by KASH and SUN proteins at the nuclear envelope (NE) establishes the physical linkage between the cytoskeleton and nuclear lamina, which is instrumental for the mechanical force transmission from the cytoplasm to the nuclear interior, and is essential for cellular processes such as nuclear positioning and migration, centrosome-nucleus anchorage, and chromosome dynamics. This entry represents an HTH domain found in SUN2 that forms a three-helix bundle to lock the SUN domain in an inactive conformation acting as an inhibitory component.
Statistics
?
PSSM-Id: 523353
Aligned: 15 rows
Threshold Bit Score: 58.5238
Created: 19-Feb-2025
Updated: 28-Apr-2025
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
XP_069036957  599 LQGRLASLEQRVFKNITSYTSQTKQMpTAQVVTSAVNGAGVTGITEEQVHAIVNNALRL 657 
XP_056654931  436 VQAQLRDLEHRILTQMAEEQGKFVRE-TAARVEQTLDKEGEVGITEEKVHRIVNQALKR 493 
5_pfamImport    1 LQEELQDLEQKILARLVQGEGQEW---AWHSVDKILESEDITAVTLQDVHAITERALKE 56  
KPP59618      305 LQQALGDLERRLLQKLAEEREKEQPD-MWRSVGETLQREGAGAVTVEDIQQIVHRALRL 362 
XP_003221058  482 LQEHLLALEKKILARISEDQEFSVQN-----VRVALQREGVIGVTQEDVHRIVNQALNR 535 
KYO36317      976 LQDQLQEMEHRILAKISEDQQMSAQD-ARASVRVALQQGGVMAVTEEEVHLIVNRALKR 1033
4_pfamImport    1 LQDKLRELEHRILASVSEGQRLSARD-AKASIGVALQQEGVTGVTEEQVHVIVNRALQR 58  
KFM02169      448 LQAELQALERKILAKVLEDRRLSARD-AQAGIGVALRQGGTTGVTEEQVHLIVGQALKR 505 
XP_053912007  468 LQTELQSLEQKILAKVLEDQALLVQD-IQAGTGVAVRE----GVTEEQVHHIVSQALQR 521 
3_pfamImport    1 IEARLQELESRILAHMAETQGKSVKE-AAASLGLMLQKEGMIGVTEEQVHHIVSQALKR 58  
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap