5J14


Conserved Protein Domain Family
Glyco_hydro_5_C

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pfam18564: Glyco_hydro_5_C (This model is not part of the current CDD release)
Glycoside hydrolase family 5 C-terminal domain
This is the C-terminal domain of endo-glycoceramidase II (EGC), a membrane-associated family 5 glycosidase pfam00150. The C-terminal domain assumes a beta-sandwich fold, which resembles that of many carbohydrate-binding modules.
Statistics
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PSSM-Id: 523339
Aligned: 105 rows
Threshold Bit Score: 49.9428
Created: 19-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5J14_A       394 RTYPQATAGEPGRMIFDADNGDFAYRFT---PRAATRPTEIFVSD-LHYp-dGYAVQVD--GG----QVT-SAP-GARIV 460 Prescottella eq...
XP_005766202 427 RPYAPLISGKPIAWHYDADSLAFTLRYVcgsSAA---PTVIFAHKaFHFp-hGVCISISpsEAa---RWE-----QPSEN 494
XP_004348056 412 RTYPQAVAGKTFHYSYDVATRIFILEYYvnaACKL--PTDIFLAEdVHYq-nGYTVSVN--PS----NVV-TQSsIKNHV 481
KJE97390     439 RSYPHAVAGTTTSFHFAAATAVFVLEYTvdtTCTL--PTDIFVAEsVHYv-nGYTVDIT--PA----NVVkMTS-STNHI 508
XP_013755552 385 RTYAYATAGVPRDMMFDAETGAFKFVWDs-wGHTIGLPTSIYLNEaMWYp-hGYSVTFIprDGa---SYS-----SPTRN 454
XP_004367541 391 RTYARAIAGTPTAMNFDPETSVFQLTYIlnlKVSQ--PTEIYLNEeYYYa-nGYVVSVV--PSqivqAKS-PGK-NLVWV 463
XP_001018205 407 RTYASAIAGKSINQYFNNTSGEYQLEYRlciECGQ---TEINYNA-EHYypqGFNIQIS--GNa---SYI-L---TSDQV 473
Q55CF6       419 RTYAQAIAGVPLSMSFNPANSDFSFSYNintTITQ--PTQIYLNQdIYYp-nGFTTNII--TG----TAT-VSIpQKNLI 488 Dictyostelium d...
XP_020437936 414 RTYAQAIAGSPQKMTFDIQTASFTFSYEidtSITQ--PTIIYLNEaMHYp-nGYTASIT--TG----SAQ-ISSpSTNTI 483
XP_004351032 386 RTYPQYVSGTTKSMSFNTTSGEFSMVYTmnpNIQE--PTEIYLNEnVHYp-nGYTFTVS--PS----KDV-VIA-STQTN 454
5J14_A       461 TVV-ADGSG-P---VTVKI 474 Prescottella equi 103S
XP_005766202 495 VVEvWHQSSsAgaeVEVAV 513
XP_004348056 482 YLT-PTSSAsNgkfVTVVI 499
KJE97390     509 FLS-PVSSSsNgkfVTVVV 526
XP_013755552 455 HLDiVPASTfPds-sTLTV 472
XP_004367541 464 YAL-PTA-T-DgatITITI 479
XP_001018205 474 FVI-PNSNSkNnevISVKI 491
Q55CF6       489 YIL-PNSNTiNqstITITI 506 Dictyostelium discoideum AX4
XP_020437936 484 NIT-PTTSTlNgqlITIEI 501
XP_004351032 455 RLLlTNNNNqPid-vTITI 472
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