Conserved Protein Domain Family
RNAse_A_bac

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pfam18431: RNAse_A_bac 
Bacterial CdiA-CT RNAse A domain
Contact-dependent growth inhibition (CDI) is an important mechanism of inter-bacterial competition found in many Gram-negative pathogens. CDI+ cells express cell-surface CdiA proteins that bind neighboring bacteria and deliver C-terminal toxin domains (CdiA-CT) to inhibit target-cell growth. Structure analysis of CdiA-CT shows that it adopts the same fold (with two beta-sheets forming an overall kidney shape) as angiogenin and other RNase A paralogs, but the toxin does not share sequence similarity with these nucleases and lacks the characteristic disulfide bonds of the superfamily. Furthermore, structural comparison analysis identified human angiogenin, Rana pipiens protein P-30 (onconase) and mouse pancreatic ribonuclease (RNase 1) as the closest structural homologs of CdiA-CT.
Statistics
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PSSM-Id: 497240
Aligned: 24 rows
Threshold Bit Score: 90.795
Created: 19-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_051653821  1392 GHTVADHIDLSGQKLLDAVKAK---------GLVTVWVDAATAQKAVAHAVeewrKvpANERVLQNWIAvqrkria-dgr 1461 Kitasatospor...
WP_066320319    63 GHTIERHVGKSTAYLRNRLNTSs-------iSAASTYYELNQAGQVIVNAI----N--TNRVRINNWLS----------- 118  Aquimarina a...
KPI29380       450 GHSIDKHVGLTDAQLTQRLRDEatgggvqqlPAASTFTDLDSAQEYTQYNI----R--SNSANIDKWLEnp--------- 514 
EDP65246        43 GDTMDRHVGRNTSELTARLVVDpa------iPETSSFPDRHTARQVISAAL----R--PDESDYDSWARs---------- 100 
WP_052106705   145 GHLIERHVGKSEQWLVDRVNRDn-------iSAASSFIDLPEAERLVAETL----M--ENQDRVDAWLDg---------- 201  Novilysobact...
WP_056709489    68 GHVLDKHVGKTTEWLHARAVKDg-------lDLATSFTSEEAANEAVEHCR----I--VNKDAISEFVNg---------- 124  unclassified...
jgi:Aaci_0529  261 GHTISEHVGKTDEELLARSRSTg--------RPSSSYTDLKTAQRAVNENM----R--VHRSQIEEFMAn---------- 316 
WP_110173865   117 GHTLAKHVGRTDAQLQARLRREs-------iSAASTYPDAETAARVVTRAL----D--ADATRVQVWVGg---------- 173  Luteitalea p...
WP_005309805   376 AHTLEQHVNKTDAQMMEKARKAq-------gGVAGRWTDEATAARAVDEAMqqwiRepRNAERLDAWVKkeaqkqgkpgy 448  Streptomyces...
1_pfamImport     1 AHTLTDHV-ISDGAAWDRAQTK---------GKATNWKDQATAARAVSEAFaqwaQapGNAAVLSKWVSkqaqkrg-kgi 69  
WP_051653821  1462 ifiPGDDLKEVPWEIstDVIPGDLAYKYelsg-kplpANPLtktPTGRKVRVFLKYVAGHPD-N--FIVYTSYP 1531 Kitasatospora chee...
WP_066320319   119 ---GGGSRLTLSYTH--RRNIGVVLRRG---------QNNP---NPSRKFRVILQKRSSAPN-G--YYVLTSYP 172  Aquimarina aggregata
KPI29380       515 --pPDPLKKDFTVPSvtEGGMATPVVTGrtapvvggnPTSP---KDAHGVLTILKYDPSLDP-P--FVVLTSMP 580 
EDP65246       101 --aKAGERAEVRMAF--EQPIGILVERG---------NGSG---FPAHGITVILEAMG-----GgaCRLVTAFP 153 
WP_052106705   202 ---AGGNRLVIDASF--DSSTGISVVRG---------SDSA---QDVYSVKLVLERSDRIEDiG--FRIVTGYP 256  Novilysobacter def...
WP_056709489   125 --tKGPNKMDFSATT--KRSVGYGVTSE---------GQKV---KSIYGVKVVFTRQGAG---Q--WQILTAYP 177  unclassified Nocar...
jgi:Aaci_0529  317 --aQKDQRLIITHDH--EKVIGRGVQKN---------SSSV---ESMTRSKVVIVKHSQDGD----AFILTSYP 370 
WP_110173865   174 --rAPKPNLAIRYRAreGIPIGRVLDRG---------DIAS---HDARGAVVVLRWRD---E-G--WFVLTSYP 227  Luteitalea pratensis
WP_005309805   449 ifdAKRDALPIEWTLrnEGSLGTVFKVGg-------pAAGE---AASNKVRILLKYVGKQHK-PskYVVFTAYP 511  Streptomyces prist...
1_pfamImport    70 afnPTVDLKPIRWELrgEGSLGKVFTKDg-------pRAGT---ATGSTVVIQLKYVKDHPK-K--YVVYTSYP 130 
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