Conserved Protein Domain Family
CBM77

?
pfam18283: CBM77 
Carbohydrate binding module 77
This domain is the non-catalytic carbohydrate binding module 77 (CBM77) present in Ruminococcus flavefaciens. CBMs fulfil a critical targeting function in plant cell wall depolymerisation. In CBM77, a cluster of conserved basic residues (Lys1092, Lys1107 and Lys1162) confer calcium-independent recognition of homogalacturonan.
Statistics
?
PSSM-Id: 497113
Aligned: 11 rows
Threshold Bit Score: 119.412
Created: 19-Feb-2025
Updated: 28-Apr-2025
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
CCY65130         825 GTITCSFTEGQPnt--naPS--GFFTVAGDKAV-KKGDMVIDGTTYSEGLKMNSKGSVSFTPSE-DMTMYLYICTSDaSE 898 
WP_007175372     613 GAVVCSFDKAGT------PSs-SLFTVMGNGSN-SKGTATYNGKTYNTCLKMESSTNISFTTTK-TMKLTLVFADTE-TA 682  Hallella b...
WP_022316365     661 GTVLCTFEGKTP------SS--SLFTVTGNYST-SKGTATIDGTTYNTCVKMESTTSITFTLAE-SMKATFYFADTE-TA 729  Prevotella...
agres:bpr_I2372  640 GSYVHNFTASGK------DS--DFFTIEGNLST-GKGTVTYNGKLLTQCLKIESKTSIKFAAPS-DGQLILVFGDKD-SS 708 
1_pfamImport       1 GAQIHDFTANGK------NS--SFYTITGNLAT-NKGTVSYNGLTLTQSLKMESATSIGFTNTA-KGDLTLVFVEP--NA 68  
WP_036627029     613 GEQVHNFTVAGT------AS--DFFDIEGNLSA-SKGTVEYNGLTLTQCLKIETATRIGFTTTE-DSTLTLVFNSED-GK 681  Paenibacil...
WP_062123884     553 GDVIHNFTLSGL------NS--TFYSISGNLSD-SKGAVVYDGLTLTQCLKIESATSIQFSIDK-AATITLVFNTGY-SG 621  Geofilum r...
CDC19372         602 GAQVHNFTLNGT------SS--SFYTITGTLTS-SYGSVNYNGLTLTKALKMESKTAVNFDPDGvAGTLTIVTNPQY-SG 671 
WP_007483665     560 GDYTCYFTADKK------PSn-SFYSVTGSYSK-DKGTATVNGTVYTWCLKLESATSVKFTIEE-EMILTLVFAEGS-TP 629  Bacteroides
EOS46361         909 GDYELYFEGKKP------NGdtDFFKVNGSY-T-DKGSATVNGTSYSGALKMESKTSLSFSCND-DAALFMVFDAS--GK 977 
CCZ12209         846 GTVTCSFSYDSTtktfgiSN--PAFTQTGSKSNyTKEETTVDGVTYKASAKMESGTEISFATTS-KMILSIYFGTGSkAQ 922 
CCY65130         899 SLDINGDDIvsdTATdGGVIISMNVQAGqSYTIKKGKSgETfLYYI 944 
WP_007175372     683 SFKFDGKKT---VGT-GSTYTFDSLPAG-EHTITKQDI-RN-LFLI 721  Hallella bergensis
WP_022316365     730 SLKVDGEKK---TAT-VSCYT-ETLSAG-AHELTKADS-HN-LFGI 767  Prevotella sp. CAG:592
agres:bpr_I2372  709 -IKLDGTAV---KEA-TNVMN-LDVRKG-DHELTKKDT-EN-LFYM 745 
1_pfamImport      69 TVKVDGTKY---TANgDGIIQ-VSVSAG-THTITKADT-AN-LYYM 107 
WP_036627029     682 KIKIDGTSY---PIT-DGIVS-VPLTPG-AHTITKDNP-VN-LYYM 719  Paenibacillus macerans
WP_062123884     622 KIKLNGTDH---NIA-DGILE-IHLEEG-DHEITKNTT-AN-LYYM 659  Geofilum rubicundum
CDC19372         672 IIELNDKAI---TIGsDGVATISLDGSQ-SYEITKGSG-SNyIFYI 712 
WP_007483665     630 NIKIDGTKV---VSAsGNIIT-SVLNAG-SHELTKADS-NN-LFYI 668  Bacteroides
EOS46361         978 RVKVDGTIY---TTDaNGTITVKPLSAG-SHEVTKGDS-MN-LVYV 1017
CCZ12209         923 NVKVDGTKI-------TGNPASVVLEAG-AHKISKADS-AT-IALI 958 
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap