Conserved Protein Domain Family
LD_cluster3

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pfam18180: LD_cluster3 
SLOG cluster3 family
Family in the SLOG superfamily, observed to associate with a predicted effector protein containing one enzymatically active and inactive copy of the TIR domain.
Statistics
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PSSM-Id: 497054
Aligned: 9 rows
Threshold Bit Score: 261.887
Created: 19-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q12I72            19 EFAYSSNSVAITSAVRALIHVTLGRRVLVWGGHPAITPMIKVVAEEMGFDYEKWVKLYQSLYFKDQFPQDNKIFKNVVYT 98  Shewanella ...
WP_013721786      17 SYHETANPFLIQCAVRELVMAVIRQHKIVWGGHPAITPMIWSICEDLGVDYSGAVVLYQSTFFKDRYPEENDRFHNVVFT 96  Pseudomonadota
WP_034951912      17 HYHETANPFLIQCAVRELVVAVIRTHQIVWGGHPSITPMIWSICEDLNVDYARAVMLYQSRFFEDRFPEENQRFGNVVFT 96  Candidatus ...
CAL61699          18 KYFDTANVFLIREAIKALIEVVLPVGRITFGGHPAITPLVSLYARHAEID-RERITIFQSKFFTELMPVENDDFIDQRYV 96 
WP_008388643      18 RYFETADVLAIRDAVKALVGVVVPRGKLVFGGHPAITPLIRRLVEDMRRPVDAHVRLYQSAFFADRFPAEVAEFEGVTMV 97  Rhodovulum ...
jgi:Acid345_4259  25 RYRNTADIIAIRDSIRALVSVVAPSGQIVFGGHPAITPLIRLLVRGMTPDVNQHITLYQSAFFRRVFPPEAAEFERIRIV 104
1_pfamImport       1 QYAATADTVAITAAVSALVHVTLGRRLLVWGGQPAITPMIWVVSQDIGVNYGHWVRLYQSRHFEDEFPEDNERFNNVIYT 80 
Q3A0F7            19 EYAATADVVAITAAVSALVHVTLGRRQLVWGGHPAISPMIWVVAQEMGIEYGRWVRLYQSRFFQDEFPEDNDRFQNVIYT 98  Pelobacter ...
WP_012382931      23 HFLGEGDSVAISAAVAALLEVTLGRRKLVWGGHPAITPMVWAFAESMGVDYGEWVLLYQSRRFEDEFPEETALFSNVVFT 102 Beijerincki...
Q12I72            99 KNIENNLEKSLLHMRELMFADNNFKAAVFIGGMGGVIDEFNLFQKFQPNKDIVPVISTGGATLKLAELMNEpLDSDLYND 178 Shewanella ...
WP_013721786      97 NAVAGDREASLLLMREEMLSRDDLVAAVFIGGMEGVEAEHELFRQFHPAAKVLPVPSPGGAALNLAKDQGY-FADADLGD 175 Pseudomonadota
WP_034951912      97 DAVPQDRDASLLHMREAMLSRDNLVAAVFIGGMEGVEVEFDLFRRHHPGALVLPVPAPGGAALDLAKKLGT--ADEALQD 174 Candidatus ...
CAL61699          97 SAIDGDRNLSIYSMRMNMIQSRKFHAAVVIGGMDGIHEEVELFRKLHPTAKILPVPSTGAAAEIVFRKGDY-AK-ELAND 174
WP_008388643      98 PAVDGDRQRSLDAMRTRMLTDQTPDAGVFIGGMEGVEEEYRLFRERWPQAPAWPIASTGAAARALWERFGP-ARPDLSNE 176 Rhodovulum ...
jgi:Acid345_4259 105 ESIDMDERESLRVMREAMIAGHDYDAGVFVGGMDGVELEFEIFRRRHPNKPAYPIASTGAAARMLFNEHAR-DHVELLTD 183
1_pfamImport      81 DEVEKDREKSLLAMRERMFSEHKFKAAVFIGGMGGIVQEYEMFRRLQPEAAVIPVISTGGATLEVGAQVGS-LAPDLAED 159
Q3A0F7            99 PNVPEDREKSLLLMREQMFSENQFKAGVFIGGMAGIVDEFELFSRLQPNAAVVPVVSAGGAALQVAERIGV-IAPDLRDD 177 Pelobacter ...
WP_012382931     103 ERVGTDISANLAFMRSLMIEENQFEAAVFIGGMQGIVDEYRLFSVRAPNAIILPVASTGGAARVLNEMLGG--DPALAGN 180 Beijerincki...
Q12I72           179 LDYVRLFHNRL 189 Shewanella denitrificans OS217
WP_013721786     176 VDFAQLFHTHL 186 Pseudomonadota
WP_034951912     175 IDFARLFHDRL 185 Candidatus Accumulibacter
CAL61699         175 ISFASMFRRNL 185
WP_008388643     177 LAYPVLFRDLL 187 Rhodovulum sp. PH10
jgi:Acid345_4259 184 LRYLSLFRRLL 194
1_pfamImport     160 RDYVALFHRHL 170
Q3A0F7           178 LDYVALFHRYL 188 Pelobacter carbinolicus DSM 2380
WP_012382931     181 LDYVQLLYERL 191 Beijerinckia indica
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