Conserved Protein Domain Family
Rbx_binding

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pfam18113: Rbx_binding 
Rubredoxin binding C-terminal domain
This is the C-terminal domain found in rubredoxin reductase (RdxR) present in Pseudomonas aeruginosa. RdxR are important in prokaryotes as they allow for the metabolism of inert n-alkanes and RdxR is also crucial for archaea and anaerobic bacteria in the response to oxidative stress. This domain is known to recognise and bind to rubredoxin.
Statistics
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PSSM-Id: 497002
Aligned: 38 rows
Threshold Bit Score: 78.8491
Created: 19-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_010862134 325 AVRIPTQSVRVKTPLLPLQIAGTL----ASHlas-eeVGTQQIVlNDPKGMTLWQLDA-EQKRCGFVAAGEHQKQAMAML 398 Plesiomonas shi...
WP_025802314 309 HVTLPVMPVNVKTPRFPLQLAGET----RGA------DVDWQIE-QDADSLLAKAY-R-DEKLVGYIAGGTAQMQGLALL 375 Hafnia alvei
WP_015878903 309 AIRWPVMPVNVKTTSYPLQLAGDV----RSD------DLIWQLD-EDGNGLTAQAL-Q-QDKTVGFVTAGQHISRSMNLI 375 Tolumonas auensis
Q5P8G0       813 GLRLPAMPTMVKTPAMPIQVGGVT----VAD------GLQWTVD-ADETGLTGKAVND-EGELVGYVVTGKHLGNGMALL 880 Aromatoleum aro...
WP_047884480 308 RLALPPMMIKVKTPHFPVQLGSAA----QPSsgtlpdNARWQMN-VDPQGCTARMLND-AGQIKGFVVTGEHVSQALPLL 381 Photobacterium ...
WP_013051480 315 ELKLPPMLVKVKTPLLPIQLSGQT----VRN------IKHWQTQ-FDELGSITKAYND-KNEMVGFIVTQEHMKQAFPLL 382 Shewanella viol...
2_pfamImport   1 PVRLPASLVKAKTPWIPLNLAGKT----VGS------ELTWEIQ-RNSDGYVAKAFHVeTSELSGFIVSHDQAKAAFPLL 69 
WP_012156846 314 AVVLPAMLVKVKTPLYPIQLAGQA----VQQ------VNRWQLD-IDAQGTCVQAFDT-DEQLQGFVVAEQHMSKAFGLL 381 Shewanella peal...
WP_044620774 308 SLVLPAMMVKVKTPAFPIQFAGQNipedSTE------ALSWQID-VNQAGSTLKTREQ-SGQLTGYVVTQQHLPSAFPLL 379 Photobacterium ...
WP_053100913 307 AVAYGPMPTVVKTPALPIVFAGRA----P-A------DAQWFVE-GSAPHLSLQYR-E-QEQLLAYVVTGERQRERLRLN 372 Thiopseudomonas...
WP_010862134 399 KML 401 Plesiomonas shigelloides
WP_025802314 376 RQL 378 Hafnia alvei
WP_015878903 376 KQL 378 Tolumonas auensis
Q5P8G0       881 QQL 883 Aromatoleum aromaticum EbN1
WP_047884480 382 KAL 384 Photobacterium ganghwense
WP_013051480 383 REL 385 Shewanella violacea
2_pfamImport  70 RLL 72 
WP_012156846 382 KRL 384 Shewanella pealeana
WP_044620774 380 KEL 382 Photobacterium gaetbulicola
WP_053100913 373 RQL 375 Thiopseudomonas alkaliphila
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