Conserved Protein Domain Family
DNA_pol_B_N

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pfam18094: DNA_pol_B_N (This model is not part of the current CDD release)
DNA polymerase beta N-terminal domain
This is the N-terminal domain of DNA polymerase beta present in Homo sapiens. DNA polymerase beta is a repair enzyme that has a key role in the base excision repair of simple DNA lesions.
Statistics
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PSSM-Id: 523117
Aligned: 15 rows
Threshold Bit Score: 91.709
Created: 19-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_020975631         908 HVLHAPGTFWAGRNTGSLVARIGEpSQWTITN---DAagd-gaGAGTV-AVHQATGAQL-RALDETHaeliapiggagtt 981  Coryne...
WP_005629059         938 VVLDSPDVQWAGRTAINPVHRIGApSEWQVNDvpgKPsat-hpNTGARl---ETRGDAS-VVLSVPL------------- 999  Mycoli...
CeBiTec:CEPID_09975  876 RVLAAQGTFWAGRNTTSMIARLGDmDAWELSE---DRrqathaPTGAQl---ADLDATH-AQLSVPLvgst------vag 942 
CeBiTec:B841_10625   879 RILAAPAVEWAGRQQNSPVTALGT--EWELAA---DGrsa-qlPTGATl---TQEDDAH-VVLTVPL------------- 935 
Q6NFP1               886 RVLAASGTYWAGRHESNIVQRVGTpEQWEVSE---DQkra-thPSGATl---VELDEDH-ALLNVVL------------- 944  Coryne...
WP_237707966         905 ILLAAPDAIWGTRLTKNPVFRIGPpSSWEIVS---DDlar-haATGAVl---RASGQNV-AHLECPV------------- 963  Hoyose...
WP_007078357         930 VTLAAHDVVWAGRTVVSPVRRLGD--DWVVVE---SDrae-hpATGSVl----TTGPGA-ARLSVPV------------- 985  Aeromi...
2_pfamImport           1 FLAATPLLEWNGNLVENPFRH--SpSQCSLRE---DE-------DGLTlVIACDSIWDG--MDNPPY------------- 53  
WP_047259818         883 YLRQCPHISWHGHLMDNPAAVLPE---ATLTP---TD-------AGMDiVVALDTAWDA--TGSDQH------------- 934  Coryne...
1_pfamImport           1 LVRTTPHVLWNGHLTINPARVLPQ-DAYKVVA---RPdva-edA--YDlDIRLDTHWDStPGGESVH------------- 60  
WP_020975631         982 GG-------ALLRIRLTADP-SQPHVVPVVTQEDAEAAMGELTRVAAGG 1022 Corynebacterium argentoratense
WP_005629059        1000 SD-------TWIDIPFTLPPcIVNGGMPMVTVEDASAAMRKVLAIAAGV 1041 Mycolicibacterium hassiacum
CeBiTec:CEPID_09975  943 TA-------AQLNIRFTLPA---GPGVPEVTQEDAEVAMSELTRIAAGG 981 
CeBiTec:B841_10625   936 TGslpgnqaHDLQIRLSLAAdAPAGAVPIIARADAEAATTELTRLAAGG 984 
Q6NFP1               945 EGsta--pgTHAVLPIRITApAKPGQVPAVTTADAEEAMGELTRIAAGG 991  Corynebacterium diphtheriae
WP_237707966         964 PG-------GKVSLRLTVPAsCATGGAPIVTAEDTSAAMSALLEIAAGG 1005 Hoyosella subflava
WP_007078357         986 DDr------RTVEIDLTVPPsTAVGAAPVVTTDAAVRAMQVLLAGAAGG 1028 Aeromicrobium marinum
2_pfamImport          54 AV-------PALELPLSLPEsCARGGYPVVDMERMSTTAFKLLAGAAGV 95  
WP_047259818         935 AV-------KELRIPLLLGDgVRTGAVPVVDDARLSDTMFGLLAATAGV 976  Corynebacterium uterequi
1_pfamImport          61 AV-------RRLVVPLRLAR-AWDGAAPLVDPERISETMNDLLRATAGV 101 
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