Conserved Protein Domain Family
BPA_C
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pfam18040: BPA_C 
beta porphyranase A C-terminal
This is the C-terminal domain found in Bacteroides plebeius of proteins such as beta-porphyranase A (BPA), a beta-galactanase that cleaves the beta-1,4 glycosidic bond. Porphyranase degrade red seaweed glycans. This domain adopts a beta sandwich shape.
Links
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Statistics
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PSSM-Id: 496940
Aligned: 12 rows
Threshold Bit Score: 117.791
Created: 19-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
WP_051479890  691 TFNINNVDiattEVSRASAMLRMGIGRAHTGSLK------P-TLTMNGTQVEVPSDWAGYDQKNRkDGFFGSIDIPVPYN 763  Catenovulum a...
WP_062616487  519 TFAFNGVTd---LSMEGEARLRMAIGRKHDMSKK------P-RVKINGVTLNSLSNWKGYDQADR-EDFFGVIEVPVPYK 587  Flammeovirga ...
WP_067153903  511 NFPINGIK----VSE-GTSVLKLSVGRKHGMSLK------P-VVKVNGHTVGVPNNWMGGDQASR-NDFFGSLHIPVNND 577  Microbulbifer...
WP_052343401  542 VFHINSLT----LTDHNQATLRVAFGRAHTLSKK------P-QILVNGTAVAVPTNYRGDDQHLR-SQFFGMLEIPVPDD 609  Saccharicrini...
WP_013042359  545 EFKLEEVA----KNRGRDAVLRIGLGRDKDRSRQ------P-VVKFNGVPLEVPSNYRGTEQKIR-SAFFGLLEIRVPRE 612  Coraliomargar...
WP_062621845  548 EYDFKGVD----VNKTVTAQLRIGIGRPHHTVAF------P-TVSINGKEVKYHQEIQGQSQHLR-AQYFTLINVEIPQD 615  Flammeovirga ...
WP_052415319  278 NFQVNDVL----KSTFGEAVLRVGLGRLHGTSLQ------P-TIKVNGTLIDVPENWRGDNQTQR-ERFFGVLEIPVPFS 345  Algibacter le...
WP_066314029  606 TFFVNNVTlp-vDADKAEAMIKMTVTLFDAPQTEngflsiN-KLTFNGVEVETPFDWRGETQN-R-SKWFGALEIPVPAS 681  Aquimarina ag...
1_pfamImport    1 TTSVNGVVv--pSGD-YEATVRISGAFFKAHLGS------V-SVKLNGVELEHNSNWRGAMEDLR-NQWLGTLEIDIPAG 69  
WP_062617505  608 TTQINNVV----VPSQGEATLRFSGKFPENAMVP------A-YITVNGNDLEYTTDWRGEYEDSR-NFWFGTMEVDVPLE 675  Flammeovirga ...
WP_013042126  579 QFSINKVR----TGK-GDARLRLSFGREHGTDRK------P-EVLLNNQPLEVPEDWAGDTQEGR-TTFFGMLEIPVEMS 645  Coraliomargar...
WP_035015618  519 NFTFNQVP----TGK-GSAILRLSPARKLGSQPL------PsTVHINGTPLTLPTNWAGDDQKGR-NMFYGMVELEIPMQ 586  Catenovulum a...

WP_051479890  764 LIKANNQIKVTFPDNGGKVSSMILEVS 790  Catenovulum agarivorans
WP_062616487  588 LLKANNSVELSFSDEGGAVSSVVLSVN 614  Flammeovirga sp. SJP92
WP_067153903  578 ILKSNNTISVTFPDTGGRVSSVVLKVV 604  Microbulbifer thermotolerans
WP_052343401  610 LLKANNTISIQFPDNGGYISSVTMRVY 636  Saccharicrinis fermentans
WP_013042359  613 LLSEDNTVSITFPDSGGRVSSVTMQVL 639  Coraliomargarita akajimensis
WP_062621845  616 LLAENNKVKVTYPDNGGHVSSVTLKIT 642  Flammeovirga sp. SJP92
WP_052415319  346 LIQADNTVSVEFGDTGGHISTLTLQVF 372  Algibacter lectus
WP_066314029  682 LVQTNNTIVVDFQH-VGEVNIVNLLTW 707  Aquimarina aggregata
1_pfamImport   70 LLQASNTIECKTNAP-TDWAATQIQVW 95  
WP_062617505  676 YLQESNEVTIEIRGNKVTYTTVSLQVF 702  Flammeovirga sp. SJP92
WP_013042126  646 QLRSSNTVTVTFPDSGGKVACAILQVN 672  Coraliomargarita akajimensis
WP_035015618  587 ALKPQSTVSLMYPDDGGKVASAVLQVN 613  Catenovulum agarivorans
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