2YVE


Conserved Protein Domain Family
TetR_C_28

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pfam17937: TetR_C_28 (This model is not part of the current CDD release)
Tetracyclin repressor-like, C-terminal domain
TetR family regulators are involved in the transcriptional control of multidrug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. The TetR proteins identified in overm ultiple genera of bacteria and archaea share a common helix-turn-helix (HTH) structure in their DNA-binding domain. However, TetR proteins can work in different ways: they can bind a target operator directly to exert their effect (e.g. TetR binds Tet(A) gene to repress it in the absence of tetracycline), or they can be involved in complex regulatory cascades in which the TetR protein can either be modulated by another regulator or TetR can trigger the cellular response. TetR regulates the expression of the membrane-associated tetracycline resistance protein, TetA, which exports the tetracycline antibiotic out of the cell before it can attach to the ribosomes and inhibit protein synthesis. TetR blocks transcription from the genes encoding both TetA and TetR in the absence of antibiotic. The C-terminal domain is multi-helical and is interlocked in the homodimer with the helix-turn-helix (HTH) DNA-binding domain. This entry represents the C-terminal domain present in CgmR (C. glutamicum multidrug-responsive transcriptional repressor), previously called CGL2612 protein. CgmR (CGL2612) from Corynebacterium glutamicum is a multidrug-resistance-related transcription factor belonging to the TetR family. It regulates expression of the immediately upstream gene cgmA (cgl2611) by binding to the operator cgmO in the cgmA promoter. The cgmA gene encodes a permease belonging to the major facilitator superfamily, a protein family composed of bacterial multidrug exporters, and the pair of CgmR and CgmA confers multidrug resistance on C. glutamicum.
Statistics
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PSSM-Id: 523029
Aligned: 169 rows
Threshold Bit Score: 31.4816
Created: 19-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2YVE_A         79 ERLRAVV-V-TL-A-E--NV-----SRPELLLLIDAPSH----PDF----LNAWRTVNHQWIPDTDDLENDAhkRAVYLV 139 Corynebacteriu...
12_pfamImport   2 GLVRVFLrT-SL-P-QspEE-----KELYWALIAALRSH----EELeeeaVRHVQYLFEHWRELLHEELTDP--VLAEII 67 
WP_016338111   77 GVVSWYLrT-AItD-V--TQqkalhRTTMATIRIMLNEP-----RV----SEVVQVYNQKVHDLISEHVDDP--LTAELV 141 Amycolatopsis ...
WP_055764788   77 GPVAYWLtT-STaD-A--QGel--tRTYQATLRLAGAGH----AAA----RTALLEADRAWSAALEARIADP--VLARLV 140 Geodermatophil...
WP_009359166   78 GAAAYFIrT-SVwAdtp------ldRAIVAATRLAEVAH----EET----RRRFAAIQQRWLDEIAADVG-P--ALAKAV 139 Arthrobacter n...
WP_012399243   78 GAAREFLtT-SLyEdsp------ldRSLGVAFRLVQARE----PGA----RETCERVTGDWYGVILADVRDP--VIATAV 140 Kocuria rhizop...
WP_009944289   77 DVVRYFLeT-SLpA-S--DEemalyWSVIAALRSAEGLS----EDG----TEVLARVFGRWSELLTDHIGDP--VLAETV 142 Saccharopolyspora
WP_068381349   76 SVAQWYLqPpASi--S--DKet-alYRSTLAVLRSVDGN----PGEi---HQAVTEVMRLWDEGLRTEISDP--VTAEIV 141 Rhodococcus sp...
11_pfamImport   2 TVSEIYLqYpPA-EsA--DE-----MTLYRSMLAAMRSAdgrhDEV----QQAIADVMRSWDDGLLAEIDDP--VQAEIV 67 
WP_013806181   77 SIAEFYLqSp---DtTaeTE-----LQVYRSLIAALHTVdgqnHQL----RDAVTKVLRGWDEQLRAEIPDP--VQAEIV 142 Hoyosella subf...
2YVE_A        140 QLAADGLFVHDYIHDDVLSKSKRQAMLETILELI 173 Corynebacterium glutamicum ATCC 13032
12_pfamImport  68 LRAGDGLYMAAIAGLAPPDPELTGQMIDRLVEES 101
WP_016338111  142 ILVGDGLYLRAA-----LGRDDASPLLDRIDEIK 170 Amycolatopsis keratiniphila
WP_055764788  141 RLVGDGLYLEGLAGLPTR--GDTPALVELLEQVL 172 Geodermatophilus sp. Leaf369
WP_009359166  140 LYMGDGLYFNAMLSVGPVPPGGAAADVDELLAAL 173 Arthrobacter nitrophenolicus
WP_012399243  141 LSMGDGLYQQAAMGLLPEDSRERHAILDRLLEAL 174 Kocuria rhizophila
WP_009944289  143 RLVGDGLYLSALSGLPNPDPELLRRVFDRLLEQV 176 Saccharopolyspora
WP_068381349  142 RLVGDGIYLGALLDLPPVDPDLHQRVVERLLGPD 175 Rhodococcus sp. EPR-157
11_pfamImport  68 RLVGDGIYLAALLGLPESDPDLHRQVVNRLLGTD 101
WP_013806181  143 RLAGDGIYLSALLGLPLPDPDVHRLVVERLTQTG 176 Hoyosella subflava
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