Conserved Protein Domain Family
TetR_C_19

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pfam17924: TetR_C_19 
Tetracyclin repressor-like, C-terminal domain
TetR family regulators are involved in the transcriptional control of multidrug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. The TetR proteins identified in overm ultiple genera of bacteria and archaea share a common helix-turn-helix (HTH) structure in their DNA-binding domain. However, TetR proteins can work in different ways: they can bind a target operator directly to exert their effect (e.g. TetR binds Tet(A) gene to repress it in the absence of tetracycline), or they can be involved in complex regulatory cascades in which the TetR protein can either be modulated by another regulator or TetR can trigger the cellular response. TetR regulates the expression of the membrane-associated tetracycline resistance protein, TetA, which exports the tetracycline antibiotic out of the cell before it can attach to the ribosomes and inhibit protein synthesis. TetR blocks transcription from the genes encoding both TetA and TetR in the absence of antibiotic. The C-terminal domain is multi-helical and is interlocked in the homodimer with the helix-turn-helix (HTH) DNA-binding domain. This entry represents the C-terminal domain present the transcriptional regulator heme-regulated transporter regulator (HrtR), which senses and binds a heme molecule as its physiological effector to regulate the expression of the heme-efflux system responsible for heme homeostasis in L. lactis.
Statistics
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PSSM-Id: 496842
Aligned: 48 rows
Threshold Bit Score: 67.9711
Created: 19-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_016186281  85 DLFLGINDYFSKLVPEIFEGEHALFYKNLFMNMDY-REFKRVTPEWEKNRRQQRdahqkeKNELLEMIDSSKLMLNSTDE 163 Enterococcus su...
5_pfamImport   1 NIINIFINIYDHLIEVGKIRRNNKLFRQIFENIKT-SDNLMLTRKEEMNKKLEKi-----LQDLYSK-NKDILNIKNEEE 73 
4_pfamImport   1 DLFVMYIKMFDYFGDYSSQKQTMKIMRNIVDSF---KANDDLVSEYLKNRFNMAl----tNNEIYTMVDRQNLKFQDNES 73 
CCX83804      85 DIFVTYDLLFEILCECSKDAKQSIIMKNLIKNI---KANDSLVSEYFINRFKGVa----eLVSVTNNFDRSNLKYTSDED 157
CDF02007      85 NIFKMAEVTFNAAAT-CNECENIDVIRNFFISLRI--SNNTFTNMFKELHFENDf----fWERLRDFAEKSGFIRQDDEF 157
CDD38836      85 NLWMAFQDVMEAMLSFCSKRSNFEFLKNIMAHVNSdDMLRGFSKKGGDYTRLPGc----aEQWVYEHMDSKNLKTKSFEE 160
WP_006782321  85 DIWEMFHGLLQQGLKYCSNHDVFQLFRNVATYP---EVEQILRRECETDDGMGA--------WIRKYVDTSNLCSPDDEG 153 Hungatella hath...
WP_013657567  85 DLLSAVEEFFEDYIQHLTAEENKKLERNIFLSMNE-KMKNKMIPTHKEHPCMEG------FKTVMEAIDRAKLGLASEKE 157 Cellulosilyticu...
WP_023055294  85 NLKETLNKYREFLLKTLYDQKKRNLYKHKFLNWDE-KIEDYYKKEFIEENLKDL---------KNPQIEIENI---NKKE 151 Peptoniphilus s...
WP_016172978  85 DLFEGIANYLEKIAVLSKTAKEWQQIQLLTANPAV------FAKRNHHIDGQNAm-----VLQWQELLLKNDIELDTLEE 153 Enterococcus
WP_016186281 164 LKLLFQLLMQITMSTISEAQVQQFEQpnyelEQVYEKFYLKINWIKNGV 212 Enterococcus sulfureus
5_pfamImport  74 FKLVIEILSAITRRRIVASLKYKNS------AEAREDFLKEIEYIKRGI 116
4_pfamImport  74 VKCLIEILTQVLKNAIFDVFVAGSDR-----EEVRERLIKKIDIIKQGA 117
CCX83804     158 VKCLSQILTQVLKNAVFNVFVIGKPF-----DEVHREYHRKLEIIKTGA 201
CDF02007     158 IEDVVNMLALIMGRSLADLYCDYGNA-----EKYKQNFYTQLDIIRRGA 201
CDD38836     161 FHCLFTLGMSSVGIAIREFYEGTSK------DEVRKLFAERIGLLKYGA 203
WP_006782321 154 MHDIMTIGCGILGEAIGQFYKNGASL-----DEVNRVFTRRLEILKRGA 197 Hungatella hathewayi
WP_013657567 158 FKYLGKMINGMLFRLLTQFLNDITSK-----EECLEIFRFEMDIIKRGL 201 Cellulosilyticum lentocellum
WP_023055294 152 MMEFINFIKSIIHELIKESFRNDYTR-----EKFIEVYKLYTNWILRGV 195 Peptoniphilus sp. BV3C26
WP_016172978 154 TQELLFLIMDFVMEILTAFIVNDWDE-----KQLLKVYRMRIKWLKNGI 197 Enterococcus
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