2NP3


Conserved Protein Domain Family
TetR_C_16

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pfam17920: TetR_C_16 (This model is not part of the current CDD release)
Tetracyclin repressor-like, C-terminal domain
TetR family regulators are involved in the transcriptional control of multidrug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. The TetR proteins identified in overm ultiple genera of bacteria and archaea share a common helix-turn-helix (HTH) structure in their DNA-binding domain. However, TetR proteins can work in different ways: they can bind a target operator directly to exert their effect (e.g. TetR binds Tet(A) gene to repress it in the absence of tetracycline), or they can be involved in complex regulatory cascades in which the TetR protein can either be modulated by another regulator or TetR can trigger the cellular response. This entry represents the C-terminal domain found in a number of different TetR transcription regulator proteins found in Actinobacteria. TetR regulates the expression of the membrane-associated tetracycline resistance protein, TetA, which exports the tetracycline antibiotic out of the cell before it can attach to the ribosomes and inhibit protein synthesis. TetR blocks transcription from the genes encoding both TetA and TetR in the absence of antibiotic. The C-terminal domain is multi-helical and is interlocked in the homodimer with the helix-turn-helix (HTH) DNA-binding domain.
Statistics
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PSSM-Id: 523022
Aligned: 67 rows
Threshold Bit Score: 69.9025
Created: 19-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2NP3_A       101 DGIGERVVRAHLSVWD-DvSSRPALXTXVRSAaIHRAAAARLRETATGILARALGGVITGE-DAXLRTSXVATQLVGLAX 178 Streptomyces co...
WP_191898451  78 EELPRRLAEYVAERLRsD-RGSPVLEALARSS-ASPEIHGILRDRVNSAIMEPLAARLSGA-DARLRAAVATALVTGSGT 154 Planomonospora
WP_068208578  81 EELGRRVVRQIMMSRG-R-GGLVVFGTIVRAS-GRPDIRATLATSMIERFVVPIAPLIPRS-DAETRAHLFAAQLVGLMT 156 Rathayibacter t...
CDK01785      88 ETLGERLVRYVIDTEY---EVRGVYLALVRAS-DAGDVASALHLAHDHNFVEPLRAILTGS-DADLRARLVAAAVGGLMS 162
WP_055949982  74 DTLGERFIRYVLEAGP---QVRAMFLAILRAS-DSDNIGVELRRQHELGFVGPLRARLGGA-DADLRASLAASLVAGLLY 148 Curtobacterium ...
KUL39141      74 AEFGPRFVARLLADDD----IRGVYLALVRGS-NEPQIKERLQAIHEHTFVGPLRARLTGP-DADLRARLAAAVIGGLLY 147
KRA37573      96 ETVGRRLVAYLIDTDN-A-SIRGRFVAIARGS-HLAQVRDEMVRHTAEAYIAPLAPRLDGE-DREVRVALVAAQVAGLLN 171
WP_014441842  74 ESIGRELVRFVLDASD-R-PVAGIYRAMLTAS-DRPEIKQRLRSSMHDVFVAPLADRIGGA-FPELRARLVAAQFAGLIN 149 Actinoplanes mi...
WP_050066031  71 ESVGCQLVRRVVDRRD-N-GEPDALSMAPTLI-HESDDPDTVRDGIRTRYVAAVAERIGDAgAGHVRSQLVLTTLLGLAG 147 Rhodococcus sp....
WP_045075845  66 EPLGFQLARRLVERRE-T-GQPEPWAMAPIRV-HDSPDRELAREETRNKYLGWLSERLGPQ---QQKAELVMALLIGFGS 139 Psychromicrobiu...
2NP3_A       179 XRYVAHLEPLASADTDTVARHYGRAVQAIV 208 Streptomyces coelicolor
WP_191898451 155 FRQLYGPEAIELPEHEAVVERLTRMFQVCL 184 Planomonospora
WP_068208578 157 ALVVYDDVHLREAPLEEVVELYGAGLQQLL 186 Rathayibacter tanaceti
CDK01785     163 TLWLVRDTALLDADPEALIRTYATAIQQLV 192
WP_055949982 149 ALWVVGDEQLLAADHEEIVAKYGRLMQELV 178 Curtobacterium sp. Leaf261
KUL39141     148 ALWVVSDEQLVATAPETLITHYGALLQQLI 177
KRA37573     172 LLFLQEDPVLSTAAPETLVALYGDAIQQLL 201
WP_014441842 150 AYWLVADPVLSRADRPAIVALYGDAIQRLL 179 Actinoplanes missouriensis
WP_050066031 148 AMRHVGLLTPDVVEREELIRRYGALVQAVI 177 Rhodococcus sp. RD6.2
WP_045075845 140 GMRSIGL--FAEVPAEELIQRYGAILQQII 167 Psychromicrobium lacuslunae
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