Conserved Protein Domain Family
TetR_C_15

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pfam17918: TetR_C_15 
Tetracyclin repressor-like, C-terminal domain
TetR family regulators are involved in the transcriptional control of multidrug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. The TetR proteins identified in overm ultiple genera of bacteria and archaea share a common helix-turn-helix (HTH) structure in their DNA-binding domain. However, TetR proteins can work in different ways: they can bind a target operator directly to exert their effect (e.g. TetR binds Tet(A) gene to repress it in the absence of tetracycline), or they can be involved in complex regulatory cascades in which the TetR protein can either be modulated by another regulator or TetR can trigger the cellular response. This entry represents the C-terminal domain found in a number of different TetR transcription regulator proteins including SlmA proteins found in E. coli. Unlike other TetR proteins, SlmA functions not as a transcription regulator but rather as an NO (nucleoid occlusion) factor. TetR regulates the expression of the membrane-associated tetracycline resistance protein, TetA, which exports the tetracycline antibiotic out of the cell before it can attach to the ribosomes and inhibit protein synthesis. TetR blocks transcription from the genes encoding both TetA and TetR in the absence of antibiotic. The C-terminal domain is multi-helical and is interlocked in the homodimer with the helix-turn-helix (HTH) DNA-binding domain.
Statistics
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PSSM-Id: 496837
Aligned: 62 rows
Threshold Bit Score: 41.4818
Created: 19-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_006972221     91 PLVESIDSLGRVLIEVYGPKPLLYRHMVAVLDELELA-EAVQAVVDECITGFADVLRARAHEHRRPDFERAAWICVQLGV 169 Plesiocystis...
WP_025410263     97 PLDVAVDGFLDPLLTYIERHPDVLHVLRRPG---RGA-RRHPELEALLLQTAERIVRARTPEASPAARAARAATMLAVVD 172 Gemmatirosa ...
jgi:AciPR4_4117  74 PLAEAVAAIMEIVVVFHQKHPAFRTLLTEALLSEGAM-GEKHRLSETFVGQLAEFLTMRRPALAKADALWSAEVCLTILK 152
WP_012236109     96 PLEAALDRLAGRLIELELAHARVMKALMRWFVRVGDF-DLIAEADREAEAALAELLARIRPKTRAVDPQLGGFFLFHAMR 174 Sorangium ce...
Q89MG3           95 PPPARLRALVHAFIRSECEEAAIRTALSDAAPLYRDA-PEAHDARAAGKGIVAAFMREALPKASDATRAVAGELITTTLS 173 Bradyrhizobi...
BAK66081        105 DLQSVAEGLAAAWLEAKMADLVSSRAIYGIATEFNLE-ELMNRAKHLMVGAISPLLRSVPDARF-ADPDSAAFMLAALLG 182
WP_024020750     96 SLSDCADTFVDAYIDAKAGDVAVSRALYHASTELDMQ-DLGAAMIARLHQAVRGLLEHVQGERF-EPLDSIVFSWVAVVT 173 Alphaproteob...
WP_004335970     76 PIADMAQALVHAFIGAKLEHPAASKALYAVAEEHGGA-ALVTHAKARMHKAVALMLDTATDARF-NELNTVSLLTMSAMI 153 Thauera lina...
WP_066126703     96 PLADMVRAVVRAFVHAKTEHLEEGRALYALAGELETR-ELVHRAQQRHRTLLADMLATARDAVL-EDLPTAAYMFSTAMT 173 Bordetella a...
WP_013662914    102 SLDEFIEKAIDLNLHTYRSQKAILVLVQAMF-SIPELkELDERHDNLVIRYMADFFQRLGFKQPEDERGRIARLYLEVTH 180 Marinomonas ...
WP_006972221    170 QLLRAAARERPewIADQSLFeELRAMMRGYL 200 Plesiocystis pacifica
WP_025410263    173 GVLTRTERVAS--PPASTMMrELKRAIVGYL 201 Gemmatirosa kalamazoonensis
jgi:AciPR4_4117 153 GFLPQVAGRKT--AERTRAIeSMNQVMVRFL 181
WP_012236109    175 NTLGMAAFREGdmLRAPAAQaELTRLLYGYL 205 Sorangium cellulosum
Q89MG3          174 EVGKRFSETPRsaAEIARHAeGLADMFCAYL 204 Bradyrhizobium japonicum
BAK66081        183 GTVRVVMEAGTaeEDLERLRqELPRACLGYL 213
WP_024020750    174 GGTRVLFEEDGtaERLPAFRaQLKLISRAYL 204 Alphaproteobacteria
WP_004335970    154 GPVQALLEEDAsaEFTKALRaHLCRLIQAYL 184 Thauera linaloolentis
WP_066126703    174 GPILAVIEGKApaRLVRALPhHIESLCLGYL 204 Bordetella ansorpii
WP_013662914    181 ASYLVIVNQNN--QRAARTLvDLKRMISGLL 209 Marinomonas mediterranea
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