Conserved Protein Domain Family
zf_Rg

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pfam17915: zf_Rg 
Reverse gyrase zinc finger
This is the N-terminal zinc finger domain present in reverse gyrase proteins. Most reverse gyrases have a conserve the N-terminal zinc finger domain adopting a treble clef fold, suggesting the importance of this domain domain for the proteins function. In addition, these proteins contain a second zinc finger of zinc beta-ribbon type that is grafted into the Toprim domain (pfam01751). Deletion of both zinc fingers abolishes supercoiling activity of reverse gyrase. The structure of Thermotoga maritima reverse gyrase shows that the N-terminal zinc finger firmly attaches the H1 (helicase 1) domain to the topoisomerase domain contributing to double-strand DNA (dsDNA) binding.
Statistics
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PSSM-Id: 436137
Aligned: 6 rows
Threshold Bit Score: 77.8967
Created: 19-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_012674047    1 MIYAIFEKLCPNCHGEISSYRLEKGLPCKKCLPDEdLDVCQHVKPGDIKQ 50   Sulfurihydrogenibium azorense
WP_012083127    1 MIDLVYKGLCPNCGGDICSDRLDKGLLCKRCMPKE-GEPCEVLKEGEFVK 49   Nitratiruptor sp. SB155-2
WP_012991133    1 MIGAVFKNLCPNCGGDIGADRLQRGLPCERCMPQE-GDPCHLLTEGQLRI 49   Thermocrinis albus
1_pfamImport    1 MITSVFHSSCPNCQGPLEDYRALAGLPCTSCMPGS-VDSFKDLPQEEKIK 49  
WP_012963985    1 MIKSLLLKLCPNCGGDITAERLIKGLPCQNCMPDEdKNLCEALKEGSLKK 50   Hydrogenobacter thermophilus
WP_008287348    1 MSLLIVERGCPNCGGAISDERLGRGLPCYRCLPEPsDDVCGALGSLHRLK 50   Hydrogenivirga sp. 128-5-R1-1
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