6K0R,6K0R,8ETS,9B1D


Conserved Protein Domain Family
TIP49_C

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pfam17856: TIP49_C (This model is not part of the current CDD release)
TIP49 AAA-lid domain
This family consists of the C-terminal region of several eukaryotic and archaeal RuvB-like 1 (Pontin or TIP49a) and RuvB-like 2 (Reptin or TIP49b) proteins. The N-terminal domain contains the pfam00004 domain. In zebrafish, the liebeskummer (lik) mutation, causes development of hyperplastic embryonic hearts. lik encodes Reptin, a component of a DNA-stimulated ATPase complex. Beta-catenin and Pontin, a DNA-stimulated ATPase that is often part of complexes with Reptin, are in the same genetic pathways. The Reptin/Pontin ratio serves to regulate heart growth during development, at least in part via the beta-catenin pathway. TBP-interacting protein 49 (TIP49) was originally identified as a TBP-binding protein, and two related proteins are encoded by individual genes, tip49a and b. Although the function of this gene family has not been elucidated, they are supposed to play a critical role in nuclear events because they interact with various kinds of nuclear factors and have DNA helicase activities.TIP49a has been suggested to act as an autoantigen in some patients with autoimmune diseases.
Statistics
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PSSM-Id: 522985
Aligned: 19 rows
Threshold Bit Score: 70.7474
Created: 19-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6K0R_L       273 ILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLD 338 human
Q8STP2       365 IIRRRMKEEGLEMDDDAFGFFVGLSTSRSLRYCISLIPLLKTY-----GGCVSVRNVEEVAELFHD 425 Encephalitozoon cuniculi GB-M1
Q12464       367 ILSIRAQEEEVELSSDALDLLTKTGVETSLRYSSNLISVAQQIAMKRKNNTVEVEDVKRAYLLFLD 432 Saccharomyces cerevisiae S288C
Q9M2X5       368 ILEIRCQEEDVEMNEEAKQLLTLIGCNTSLRYAIHLINAAALACLKRKGKVVEIQDIERVYRLFLD 433 thale cress
XP_012821814 369 ILKIRCEEEDVDMTEDAYTVLTRIGLETSLRYSMQLITAASLVCRKRKGTEVQVDDIKRVYSLFLD 434
Q8ID85       367 ILEQRAEEEDVDIDEYAKELLCKIASESSLRYALHLITLANLVSKKRKATEVTVQDVRRVYNLFID 432 Plasmodium falciparum 3D7
Q9GZH2       366 ILSIRCDEEGVKLQPTALDLLVKLQEATSLRYCIHLIAASEVIRIRSKAEIVTTDHIGSAYRLFFD 431 Caenorhabditis elegans
Q9YFB5       392 IIRIRADEEEVLLSENALERLADIGSEKSLRYAIQLLEPAMIVAKRRGSRRVEAEHVEEAERLFAD 457 Aeropyrum pernix
O28462       366 IIEIRAAESGIMLSNEAMEKLTDIGEKTSLRYAVQLLAPAYEFAKMRNSGKVELEDVERAASIFAD 431 Archaeoglobus fulgidus
8ETS_W       353 ILSIRAQEEEVELSSDALDLLTKTGVETSLRYSSNLISVAQQIAMKRKNNTVEVEDVKRAYLLFLD 418 Saccharomyces cerevisiae S288C
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