4RO1,9G8O


Conserved Protein Domain Family
OB_Dis3

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pfam17849: OB_Dis3 (This model is not part of the current CDD release)
Dis3-like cold-shock domain 2 (CSD2)
This domain has an OB fold and is found in the Dis3l2 protein. This domain along with CSD1 binds to RNA.
Statistics
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PSSM-Id: 522978
Aligned: 69 rows
Threshold Bit Score: 66.088
Created: 19-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4RO1_A        169 YAIFIPKDKRLPFITIHKNDLsdlsgENWIE--NILKHHDQLFSVEITRWSIYSRWPMGVLGEKLGNITDVEAYTNALLL 246  Schizosacchar...
XP_014564158  302 YVLMIPIDRRMPTIRVRTLDA--------------QKLKGKRLCVEIDTWENTSKYPSGCYYRELGDVGDKDVEIESLLL 367 
XP_008074156  300 NVLIKPMDKKYPPCRIQTSNV--------------GRIKDKRLKFIISEWKETSKYPNAVYLGTIGPIKDVEVEINSILL 365 
XP_001304301  305 SLLVVPQQENLPKIRIRSRQV--------------QELIGMRVHVAIDSWAINSKYPSGHYISTIGQAGNLQAESEVILM 370 
XP_001744179  352 LFLFTAKEATLPPIRFRSQQP--------------DKLVGQQIVLAVDGWPTNSKYPIGHLVRVLGPIGDVNTETEVVLL 417 
EJW02130      478 YAIVTPLDRKLPNIRINTIQS--------------SELLNQRILCRVVDWDVDSFYPLGVYIRRIGSVGDLDSEIEGVKV 543 
Q8IDB6        498 LMFFKAFNNKIPYIMIKAQLE--------------DELRNKRVIVTIDNWDIYSRNPLGRCISVLGNCDDIETETKLIYN 563  Plasmodium fa...
XP_001388218  443 HRIFVPIDPKIPKIIIHTKLS--------------STIENQRLVVVIDEWDCSSFYPTGHIVGVLGKAGDLETETSVILR 508 
XP_002261518 1457 YNLAIPFKKTIPFIKVENKHI-----KEFIKksNIADIMNQMAYIKIFQWNTNDIFPEGRIVELLGQNDLFHNMQNAILL 1531
XP_024500295  387 NCLFLPADPAYPKIRVRIKRY--------------DEICGKRIIVKVDDWPSNSRYPIGHYVRMIGNAGDVNVENEVILL 452  Strongyloides...
4RO1_A        247 ENG 249  Schizosaccharomyces pombe 972h-
XP_014564158  368 ANR 370 
XP_008074156  366 LNE 368 
XP_001304301  371 TNE 373 
XP_001744179  418 EHA 420 
EJW02130      544 SCG 546 
Q8IDB6        564 EYN 566  Plasmodium falciparum 3D7
XP_001388218  509 IRD 511 
XP_002261518 1532 NYN 1534
XP_024500295  453 EHD 455  Strongyloides ratti
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