Conserved Protein Domain Family
PDZ_6

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pfam17820: PDZ_6 (This model is not part of the current CDD release)
PDZ domain
This entry represents the PDZ domain from a wide variety of proteins.
Statistics
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PSSM-Id: 522965
Aligned: 60 rows
Threshold Bit Score: 41.3677
Created: 19-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_001744544  454 FITTVVPGGPSDKglAG-LLPRDIILKVNGTPCprGPRTHVVALVKntPPGQPLELVVCR 512 
WP_015266209  130 VITYVKKGSPAEQ--AG-LKRNDRFFEINGIQI---TTTNYSSLIQ--STGEVHTLDIRR 181  Echinicola vietnamensis
CCI47757      115 QITAVMDGTPASR--CG-LRVGDIVVAVSGLPVseLQFSNIIGYLKs-NARKSVVLKLRR 170 
XP_015433657  377 LVETIVAGSAAAI--AE-MRKGDILVAVDGKKV--SNMNQVAKFVKs-AVQRRFIIRVER 430 
XP_005827830  293 VVDQILPDSPARK--IGkIKPGDILLSVGDKSTkgMEVHQLAPYILg-PVGSSVSLKFRR 349 
XP_005838177  170 VVARRHAEGPACR--CGeIDNGDVLVAVDNHVIg-TDVHKASRLILg-STGTVCRLKIRK 225 
XP_005833893  323 IVGDIVAESAAAR--EGtIEVGDVLVSIDSILVlhMSMQQVLDLLRg-PLGSTVVLVVLK 379 
XP_005823652   17 LVKELQPGCPAMQ--SKlIQVGDRIVAANNVNV--QSTGHTISLLRg-PARSQVRVDFER 71  
EPF31040      413 QILYAAPGGSADY--AG-LCANDIVTAVNGKAV--RSIEELQQYLIg-CAPFSLARVSYR 466 
XP_005841026  258 HVRGLEPDGPGWR--GG-VQVNDLVTAVNGKVV--ENIDDIYRCISs-HPPSDKMFTVTV 311 
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