Conserved Protein Domain Family
PDZ_3

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pfam17815: PDZ_3 
PDZ domain
This entry contains the second PDZ domain from plant peptidases such as Deg2. This domain is involved in cage assembly.
Statistics
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PSSM-Id: 496756
Aligned: 32 rows
Threshold Bit Score: 137.703
Created: 19-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EDO41765       296 VPTQLYDKRPSYLVYAGLVFVALSQPYMQHQygKDWARKAPIRLCDRAlyGILEN-----------PDQEVILLSQVLAS 364
XP_004339571   366 VPTPTYDVPPSYFLYCGLLFQPLSKDYLTTW--SNWRKNAPKEYVHFYecGIPEK-----------DRTQVVVLTKILAD 432
WP_012831747   314 VPRTEYDRDPDYFVYGGLVFQTLTRELLRTW--DKWFNKAPKEFLHAYymGHRTA-----------ERQQLIVLTQVLSD 380 Haliangium oc...
XP_013757023   368 VPKQQYDIKPVYFIYGGLVFQPLTRGLLETW--DDWRETAPKDLLYHYkcGVRTP-----------ELEELVVFSGILSD 434
WP_006806439   338 VKNVTLETAPSYLVYGGLLFEPLTNNYMGV----T-----QGALNSVYekEESFK-----------DYSELAVLVRVLPF 397 Pseudoleptotr...
WP_002709445   404 VKPNQYDKQPSYFIYGGFVFMPLNQDVIDA------MDGLPARIG-ALtyESPDE-----------NRSEAVIMTKVLPA 465 Thiothrix nivea
GAK48960       349 VPPEQYEEIPRYFIYGGVVFTPLTKNLLTRYg-TNWMENAPDYLVAEl-dKPITE-----------QRQEVVLALKVLSA 415
tgen:AM1_G0047 356 VPLEQYNELPRYFIFGGIVFSPLTKNLIKSWg-INWSKTAPKELLIEl-sNWPSR-----------EKIEIVVATRVLGS 422
WP_082628051   360 VRSEEFDAVPEYYIYGGILFVPLNMNLIKRWg-NDWTRSAPVNMLH-ArsQWASP-----------EKREVVVALQVLAA 426 Pseudohongiel...
XP_005760844   358 PRNHGFDCFPHYVIIGGLVFVRLCCPMLED----KRSKGHHSAIYDLVnyQIARSfppadgggeggEVAEILLLTEILAA 433
EDO41765       365 ELTTGYEN---IANLQ---------------------LFKVNGTPVLNLKHLAKVLveithpfettgdptvithagrnps 420
XP_004339571   433 RINVGYDDdgaYTNSS---------------------VTSCNGVPIRNLQHLVD-------------------------- 465
WP_012831747   381 EINIGYDR---FYNES---------------------VMAVNGVMPRDMAEFVRML------------------------ 412 Haliangium oc...
XP_013757023   435 SINYGYDD---YEHAI---------------------ISSVNGVKVASVRDFVTKL------------------------ 466
WP_006806439   398 DVNLGYSD---MGNLI---------------------ITKVNGQKYKDFKDFVKKV------------------------ 429 Pseudoleptotr...
WP_002709445   466 DINKDYHH---DSNLL---------------------IEKINGENIRNFAEFFQKI------------------------ 497 Thiothrix nivea
GAK48960       416 EVNQGYED---VFAWI---------------------VNEVNGQTFKDFTEFYRLV------------------------ 447
tgen:AM1_G0047 423 EVNRGYHG---IAGWI---------------------VKEVNGKKFKDFSEFCQLV------------------------ 454
WP_082628051   427 DVNLGYHD---VRNWI---------------------VETVNGEPIRDFYDFSRKL------------------------ 458 Pseudohongiel...
XP_005760844   434 PLNYGR-----VCHARdgprgggeevgrrytchawrvLDTLNGQRPKSLRALHQMY------------------------ 484
EDO41765       421 svetrqatrtdiasgsegvvsnrqnytsfasiedevrdvtkseasvmcesrtmsfegegtenratsradhqrdiersaps 500
XP_004339571       --------------------------------------------------------------------------------    
WP_012831747       --------------------------------------------------------------------------------     Haliangium oc...
XP_013757023       --------------------------------------------------------------------------------    
WP_006806439       --------------------------------------------------------------------------------     Pseudoleptotr...
WP_002709445       --------------------------------------------------------------------------------     Thiothrix nivea
GAK48960           --------------------------------------------------------------------------------    
tgen:AM1_G0047     --------------------------------------------------------------------------------    
WP_082628051       --------------------------------------------------------------------------------     Pseudohongiel...
XP_005760844       --------------------------------------------------------------------------------    
EDO41765       501 sfgsnsktslnstfsgldedptLISRE---DYVHFELDK-DKIIVL---HIPSAAKHSPEILRQYAIGQPCSDD 567
XP_004339571   466 ------------------------------EIITLVTSE-NGVVVLpapKHKTAEEAKERILRVYKIQQDRSAD 508
WP_012831747   413 ----------------------D-EAT---GVVEIRSSG-PGVMLF---DSEQVEAANARILARYHITRDRSLH 456 Haliangium ochraceum
XP_013757023   467 ----------------------ETAIAggsSTISIRTDN-DIILFF---DVDEVAAKQPAILDRYKVPFDRSIH 514
WP_006806439   430 ----------------------QAVNS---EFIVFETDR-GEEIVL---DVKQVQAEKAELMRNYNITSDMSDD 474 Pseudoleptotrichia ...
WP_002709445   498 ----------------------QSASS---DFITLETAD-DYQIVI---ERKEALANQPNILSRYGITSDRSKD 542 Thiothrix nivea
GAK48960       448 ----------------------MTSKE---PYLVLRDED-FVELVL---DRQKAEAANPKILATYRIEHDRSPD 492
tgen:AM1_G0047 455 ----------------------TTSNS---PFVAFKGAR-NFQIVI---DKKEAEESLDEILKNYRIGAAYSED 499
WP_082628051   459 ----------------------HNNEE---PYVVFRSES-GFQLVV---DHQQARDSELDILNRYRIPAPYSEG 503 Pseudohongiella spi...
XP_005760844   485 ----------------------RAVPDg--AFLEFVFSHgGDQIVL---DATECRQSEPDILQLHAIPSATSDG 531
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