Conserved Protein Domain Family
RL

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pfam17797: RL (This model is not part of the current CDD release)
RL domain
The RRM-like (RL) domain is found in the N-terminal region of the polyA polymerase PAPD1. It contributes to PAPD1 dimerization and has a fold similar to RNP-type RBDs.
Statistics
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PSSM-Id: 522953
Aligned: 13 rows
Threshold Bit Score: 126.362
Created: 19-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_001375646  57 TFSEVQKERHEQAQRSILISCPKKVPEKRLLKHLCQHGEITNHFFFESFGIHAVIEYSKKESIASLQDSTF 127
XP_001493802  61 RFSEVQKERREQAQRTVLIHCPSKISEKKFLKYLSQHGPIHNHFFYESFGLYAVVEFCQKESVASLQSVTR 131
XP_003468693 118 TFPEVQNERREQAQRTVLIHCQNKVSERKFLKYLSQHGRIHSHFFYESFGFYAVVEFCQKDSVDSLLKGTQ 188
XP_001507658  61 TLAEVQAERAEQAQRTVLINCPHKINEKKFLNYLSQHGAVNSHFFFESYGVRAVVEYSKKESVASLLEAAR 131
XP_008110583  59 TFSEVLAERKEQANRTVLINCPSKITEKKLLKYLSSHGNIKNHFFYETHGIYAVIEFSELDSIASLQDATG 129
EMP31620       5 TFPEVQAERLEQAQRTVLINCPAKISEKKFLKYLSHHGKINSHYFYESYGTYAVVEFSEKDSIASLQDITR 75 
KYO46845      23 MFTEVQAEGLEQAQKTVLISYPTGISKRSILQYLSRHGNINSHFFYEGHGPHAMVEFSERESIYSLQDVAQ 93 
4_pfamImport   1 SFYMLQEERQEQAERSVLISCSHKITEKRFLNYLSRHGDINTFFFYESFGVYAVVEFSKKESVASLQDGAS 71 
3_pfamImport   1 SFSLIQEKRHDQAERSVLINCPPNTNKKKFLAYISKHGDIRNHFFYETYGIYAVVEFSSRDSISSLKENCT 71 
XP_014330008  68 SLSELMADRQEQAEKSVLISCPSRTSEKKFLKFLSKHGDINKHFFYESYGVYAVVEFARRDSVASLLESAA 138
XP_040023083  58 SLYAVQAERQEQAERSVLISCHTRTNEKKFLKYLSMHGDINKYFFYESYGMYAVVEFANRESLASLFEEAA 128
XP_011616478  49 SLSALQEERFQQAERSVLIGYHSRINEQTFLKNLSRHGDIKKYFFYESYGVYALVEFTNRESVASLLDEAV 119 torafugu
XP_692256     57 TFQAIQEERREQAERSVLISCPAKFSEKKFLDFFSKHGTVNKHFFYNSFGAYAVVEFSNKESIASLKESTG 127 zebrafish
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