Conserved Protein Domain Family
RPN1_RPN2_N

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pfam17781: RPN1_RPN2_N (This model is not part of the current CDD release)
RPN1 N-terminal domain
This domain is found at the N-terminus of the 26S proteasome regulatory subunits RPN1 (also known as 26S proteasome non-ATPase regulatory subunit 2 (PMSD2). The domain is formed by an array of alpha helices.
Statistics
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PSSM-Id: 522945
Aligned: 19 rows
Threshold Bit Score: 373.492
Created: 19-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
O96153        46 LELLITRLRDED--VNVVNLSISLLNKEIIDT-SGILTSSLLALKVLKTHYNTLIEIFNEMIF-EECKKKLSNMISALST 121  Plasmodium fal...
XP_019770465  11 LKLLVEKITGTD--PNLIPPALKMLKYLIRTS-TTSMTSVPKPLKYLSPYYAQLKETHKHMPK-GFTKRVLADVISVLAM 86  
VDM18674      39 LYMLLQRLEEPN--VNLYETALESLKNLIKSS-TTSMTSVPKPLKFLRPQYARIKNIYETIQD-PKIKALCAEVVSVVGM 114 
EPZ36164      23 LEHLVERLGDKN--EEHQGQALEGLKNSIRTA-TTSMTSVPKPLKFLRPHFKDMEAKYKGYKE-GENKRRFAEIMSVLAM 98  
CEL98512      63 LEMLVERVQDAD--PGIGKMALDALGEELRTA-TSSMTSVPKPLKFLRPHFDTIKTYFESIDDtHPNKAALADVLSVLAT 139 
BAS76967      53 LELYVVRAQDAD--PGVQKLALESMRQEIRSA-TSSMTSVPKPLKFLRPHYGTLKSYFETMPEsSDLKRYMADILSVLAL 129 
CCI41177      51 LEIAVKEICDSElgEEFKRVALEVLRREIRTA-TSSMTSVPKPLKFLRPHYDRLKLSFQTLQQ-GDAKTELSDILAVLAM 128 
XP_002680161  46 LEEMVNNICNS---PQQQRTALESLKEELKKSlTTAVTTIPKPLKFLRIHYEPLKEAYEKNTA-RDNKILFANILSVLGM 121 
Q54BC6        66 LELLVERSRDEK--EEIALAALEALKTEIRSS-TSSMTSVPKPLKFLRNHYSTLVDIYKNSKE-GKAKTSLADILSVLAM 141  Dictyostelium ...
CEO95240      64 LDHHIEVLKDPSk-KKQYVEALQAIRTEIRSS-TSSMTSVPKPLKFLRDHYSDFQKFHQNSLS-VDEKVLMADILSVVGM 140 
O96153       122 TIGD------ENNIVKFVITGNKHDLINYGHEYIKNLITKLLVEYKILKEEEnnqngltttsttsnkLVTINHIYDIVNI 195  Plasmodium fal...
XP_019770465  87 GTCGgeearnQRECLKYCLMGTAKNIGDWGHEYISQLEAEIVQQWGMFHCGL-----------------VDKMMMPLIVD 149 
VDM18674     115 ITYDnp--iyKTDTLKYRLLSKKDDIGVWGHEYVRLLTKQIVEVWDESDAFGqnet-------aldaNLKQKEYLELVGK 185 
EPZ36164      99 TFAEe----gKNLVLYYYMMGGRDGIEGWGHDYMRHLAMEIKDEYNMRFERE----------------ESVEELRGIGIR 158 
CEL98512     140 TIVNd-----QRLALKYRLAGSEDQMTKWGSEYIRNLTGEIAAEFQERQEQG----------------TDTQELMSMVFI 198 
BAS76967     130 TMSAe----gERESLKYRLLGSEGDIGSWGHEYVRNLAGEIAQEFQKRQDDD----------------MPIDALMELVQQ 189 
CCI41177     129 TMAKe----gTRESLHFKLSGNRMDLGPWGHEFVRSLAGEVGEEYDARMTTQsg------------dDPDVSDLIEMVDA 192 
XP_002680161 122 SLSIe----gERDCLKYMLEADDDEFDKWGHEYVRSLAGEIGEEYQTRLQEKiqmqeri--iqetgdDMEIMDILTLVNK 195 
Q54BC6       142 ANGNd-----ERDTLKYKLLGSGEAIASWGHEYVKHLATEIGVEYDIKKEEN----------------QSVEDLLKLVDE 200  Dictyostelium ...
CEO95240     141 TLSLp-----DGESLKYRMYGTNEPIGSWGHEYVRFIAAELGAEFTRRNEKG----------------ERVDDLMDLVDE 199 
O96153       196 VVPYCFAHNTEYEAIDLLIEVDKINDIYL--YVDEKSCDRSILYLLNLTHYSSSTDEYyKLMDVILNILKKHNKHVECLK 273  Plasmodium fal...
XP_019770465 150 VIDFNCHHNGEIQACDLLMEIDQLALLPK--FISQTTYQRMCFYLFSCAKYVDDADRQ-TIMKVVYGQYLKFGEYSKALV 226 
VDM18674     186 IIPYLMEHNAESEAIDLCMEIENLDFLEN--FTTELNFQRVCLYLISCTAYIPDPDNV-KVLRCAENIYRKYKDLGNALR 262 
EPZ36164     159 LVPFFLSHNAESDACDLLIEIEGINKMKE--YVDENTYERVCMYLQKCVSYMPYPEDV-EILKIVHEIYRRFKRFPEALG 235 
CEL98512     199 IVPFLMKHSAPIEAVDLLSEVDALEKIKE--YVDDATYHRVCLYLISMAQLLPEPEPA-QILATTYDIYTEHGQFPDALR 275 
BAS76967     190 IVSFHMKHNAEPEAVDLLMEVEDLDLLVE--HVDSTNYKRTCLYLTSSSKYLPAPDDM-LALDIAYTIYMKFEDLTSALR 266 
CCI41177     193 IVPFHMQHNAEPEAVDILIEVQRLPKLLAlkEIDINNYQRVCLYLMACAQYMSDPDDLdSMLNTAYHIFLRMEQYPDALR 272 
XP_002680161 196 IVPYFMKSASEPEACDLLIETEKLSKIVD--YCDETNYTRVCLYLGGVSKYFIEPENT-QTLKIVYDIYRKLNKLPESLR 272 
Q54BC6       201 IVPFQMTHNAEPEACDLLLEVEQLSKIFQ--YIDENNYSRVCLYLFKCSYYVPGPDDI-NILKVCVEIYIKMKQYPDALR 277  Dictyostelium ...
CEO95240     200 ILAFDMQQNVEAEACDLLIEVDCLEKIHG--LIRPDNFAKTCVYLLRMSNYLADTEEQmKMLKVVFDVYLKCGALPDALR 277 
O96153       274 ILLRLNKI--DKIKDLIFECN-DIL----------ICKQIALICSRHCVHIQFTEeeikkythLNLNEISTLTSGEHLSP 340  Plasmodium fal...
XP_019770465 227 VAILLSNE--QLVKDVFSKCS-DKV----------IRYQLAFICARHLFPLELDEn------iDIYLQLNHVLGNGWLNF 287 
VDM18674     263 YALRLNDE--SLARSIFNEAA-SLPtsrygasgtdVRRQLAYLLGKHQFIVPYDEvi-----aEEDEDLAEMLGNTRLSE 334 
EPZ36164     236 VALKLNDV--EMIKRDFEECE-DRM----------MKKQLGYILSRQQVGLTVE-----------DEEIQNIMNNNNLSE 291 
CEL98512     276 IALKLNDE--DRVTKVFSTCQ-ERV----------MKKQLALMLACQRVFCDIFDed----kiLADDELRSLASGEQLNS 338 
BAS76967     267 IALLLDNKsmQYVKQVYTATE-DLQ----------LKKQFSFIIARHGLAMEIDDeia--adgNDKEGLQEIVNNSKLSE 333 
CCI41177     273 IALLLDNE--GLVSAIFQTCG-NMA----------VKEQMAYILGRQRFSYEDE----------NDTAINEILSNSDLSD 329 
XP_002680161 273 IAMQLNDI--GLIKDTFFSCD-DSL----------LRKQLALMLGRGNYKFSVADql-----eDEGAELEEIMGNCKLSQ 334 
Q54BC6       278 VAMKISDP--ELITEIFKLVEnNKS----------ILQQLGFLVARQKIVPDNF----------NYDSISDIINNSKLSE 335  Dictyostelium ...
CEO95240     278 VAIKMNSR--PLILDVFAQCK-DQI----------VLKQLGFILSSQKLVLPEY---------EDDDEMMEIMGNGKLHE 335 
O96153       341 IFLKLAKDLDVEEPKLPEDVYKSHLE 366  Plasmodium falciparum 3D7
XP_019770465 288 YFLALGRELGVMEAKLPEDVYKIWLE 313 
VDM18674     335 HFLSLARELDIMDPKLPEDVYKQHLE 360 
EPZ36164     292 HFLNLAKELQISEAKLPEEIYKSHLE 317 
CEL98512     339 HFMLLAKELDVMEPKLPEDVYKSHLE 364 
BAS76967     334 GYLTLARDIEVMEAKSPEDIYKVHLI 359 
CCI41177     330 KYISLARDLEVLGPKTPEDIYKSHLS 355 
XP_002680161 335 YFLYLAKQLDSLEPKTPEDVYKSHLS 360 
Q54BC6       336 YFMNLATDLDIREPKLPEEIFQSHLD 361  Dictyostelium discoideum
CEO95240     336 HFLILAKELDVLEPKSPEDIYKTHLT 361 
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