8ETR,7WBT,6X6C


Conserved Protein Domain Family
NLRC4_HD2

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pfam17776: NLRC4_HD2 (This model is not part of the current CDD release)
NLRC4 helical domain HD2
This entry represents a helical domain found in the NLRC4 protein and NOD2 protein.
Statistics
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PSSM-Id: 522942
Aligned: 72 rows
Threshold Bit Score: 67.2952
Created: 19-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
8ETR_A         389 HMTFQEFFAAMYYLLEEEKEgrtNVP--G-SRLKLPSRDV--------------------TVLLENYGKF-EKGY-LIFV 443  human
EMP42425       541 HLTIQEFFAALVHYLDYKED---KFR-----------------------------------DTMDKARSC-KEGD-YEIF 580 
13_pfamImport    1 HLTLQEFLAAVRIMTSDDVS---DTQ--L-KKRFSLRTRWmt-----------------------kS-DQ-RTVF-TDSL 48  
XP_003437591   579 HVTLQCFFAALFIVLSSNTN---RSV--I-PKLFELENREtgltrvcft--aclpssdqqQQASEKESKAaETPN-LQIT 649 
XP_028931876   582 HVTFQCFLAALYLLLHGDVA---PAAv-G-HLFHRPRKSRvlellyprl--cipaarreeGRPGSLPWGA-ETVD-VQLT 652 
33_pfamImport    1 HLTVQEFFAALYYVLVEKPD---PDV------------RDs---------------------eVCHQQGM-SAGY-LDLF 42  
32_pfamImport    1 HMTIQEHLAALYCVVNLGEE---DILegLdLWFFGTSPNNttkei-----------lcdsTRLLDRD----KLEN-LQMF 61  
XP_056668261   575 HITLQCFFAAFYLLLGADVN---PSA--I-RCVFGGHKKPhqplprlfpmacfqspepeeESVLTLLQRA-ETHN-VRIT 646 
XP_064414614   578 HITVQCFFAALYMAVNSNIG---QSA--I-YSLFKYRKKTslvitcmkp---cflsteehEGRIDKQLQN-AERPnQEMT 647  coelacanth
XP_003965935   515 HATLQSFLAAFALVLNEEAP---PSSi-L-RFFTESRRRAsscqpfr-------cciqdsSKVITKASSS-ANEH-LQFT 580  torafugu
8ETR_A         444 VRFLFGLVNQERTSYLEKKLS-C-----KISQQIRLE-LLKWIEVKAKAKKLqiQ---------------PSQLELFYCL 501  human
EMP42425       581 SRFLAGLSHPATKMPLEKYVG-------TFSAEATRK-VIECLSEMNYEELQ--Sredp--------egkRRLMNLLNLL 642 
13_pfamImport   49 HLFVCGLASPCCTPALVQLARtPggtggQIWVKKRQTlVLNLLTKLCQSNLT--G---------------PKILELCHCV 111 
XP_003437591   650 AMFVSGLLSQRHQNLWLHCCP-S-----AAVEKKARQ-VARCLSKGIQKHFR--SipqpvqgekksmhamPDFVWLIKCL 720 
XP_028931876   653 ASFLAGLLSGTNFAPLAESHG-S-----EALLRKRAS-ARKCLARGIERHFR--SippavpgelkslhalPAFLWLIKSL 723 
33_pfamImport   43 NRFLSGLLSQRNQSLLARHIQ-------LRGKSKSEF-YVPWLLDEIRTLCE--Tg--------------ANILNHLHCF 98  
32_pfamImport   62 TRFLMGLVKARLEGNLTGLTE-------ILSNTFLNS-LSQWFKCQFSKEVP--N---------------PKTLNLLHCL 116 
XP_056668261   647 AVFLAGLLSQEHWRLVTECRGtS-----TPLLQKKSR-VRRCLARGLRRHFR--SipravpgevksmhamPEFVWLIRSL 718 
XP_064414614   648 ASFFAGLLSQRHKSFLGELCQ-D-----KDLIKKYED-AKKCLENGMQKHFH--SiptavleekksmhamPEFVWLIKCI 718  coelacanth
XP_003965935   581 NLFLCGLLAKANMGLIDLLAS-P-----NILKKKRSV-LKSYLSASVRSHLQ--DvpqykssegskihglSRLLWLLRCI 651  torafugu
8ETR_A         502 YEMQEEDFVQR 512  human
EMP42425       643 FESRNSQLVRD 653 
13_pfamImport  112 QESQDHQLAKQ 122 
XP_003437591   721 YEMQESRIAKD 731 
XP_028931876   724 YEMQDEGLARR 734 
33_pfamImport   99 FEQQNSSLAKN 109 
32_pfamImport  117 MELQQDSVAKE 127 
XP_056668261   719 YEMQDEHLARK 729 
XP_064414614   719 YEMQSEKLAKD 729  coelacanth
XP_003965935   652 FETGSKEIAQR 662  torafugu
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