Conserved Protein Domain Family
RecJ_OB

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pfam17768: RecJ_OB (This model is not part of the current CDD release)
RecJ OB domain
This OB-fold is found in RecJ proteins where is binds to ssDNA.
Statistics
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PSSM-Id: 522936
Aligned: 472 rows
Threshold Bit Score: 31.316
Created: 19-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
jgi:Clocel_2371  454 IDFPLSSHKI-DDSIIYDIGELAPFGKGNSTPLFGDKNLLLEKA-MVFGSdnGVLKLVFNVQG-RRIDAVAFKKYLELMe 530 
WP_008825842     436 IDCKMQAGIM-NETTIKTIESFRPFGPSNKKPLYLIEHCEVIAI-KTMGAtnKHIRLMVKQGE-HVLTTIGFNFGEYGKq 512  Haloplasma...
WP_012269276     451 IDAKVKNEKI-DIEIAKQVQRFKPFGSNNPRPNFLFEGLTVTKVfDLNGG--KYKKIIVQKDK-FVYELMLFDASEKGNd 526  Thermoanae...
WP_068515755     456 VDGETRISELlFEDNLLAFQALPPYGMSHEPPLLLVKDFEVKEV-IILKE--KHTKYLLRDGL-KELYALYFNQIADE-- 529  Caldimicro...
EEU03586         433 YDLKVDVSDM-NLELASELKMLEPYGKLNEDIRFLIEDVVPFNM-IYLGRdsRHIKFFLKQAR-NTLECMCFNAAAEVIn 509 
WP_012861762     450 IDSYLSIENI-NKTLVKEINKLSPFGLDNQEPNFTDNNVTLLNY-TKFGVdsRHFKGMVVKGN-KKLPVIGYNLGDKIDt 526  Sebaldella...
WP_013387031     452 IDGTFSIENI-DENILTDLQQVSPYGLENEHPIFLDEGLEFENL-KKFGVenRHFKTFIKKNG-KRYSAVAFDLGSKID- 527  Ilyobacter...
WP_023050126     454 IDLELSVDKI-NKNHINDIKKLGPFGLENKHPYFLDRGVKIIDT-KFFGIenRHFNGFLLKNG-KSYPLVAFDLSSKLHk 530  Cetobacter...
WP_012858789     452 VDVKFPVSQI-SSKKMTEINSLGPFGLSNDEPNFYDENIKFRNI-LIFGVdnKHFKANIRRNG-KDIQILGYNLSHKLNl 528  Streptobac...
WP_014296471     468 IEIDMEIENL-WGNFFDDISLLEPFGYQNPEPTFLIKDVVLEKV-KLFGAeeENIAAIAKTPKgMIFEIVGYGVLANKRe 545  Marinitoga
jgi:Clocel_2371  531 i-iE-EnwvndnygellpystgylinipqdlRLDIIYTP--EFNEYKGNKKIQLKVHE 584 
WP_008825842     513 l-nIgD-------------------------FIDIVGVF--EINEYNNTKTIQFQIKD 542  Haloplasma contractile
WP_012269276     527 v-kIgD-------------------------VIDVVGSI--EINSWNGIELVVINVKD 556  Thermoanaerobacter
WP_068515755     530 -----K-------------------------VKLIVGTP--FINNFSQR--LEIRVED 553  Caldimicrobium thiodismutans
EEU03586         510 mieEqK-------------------------HISIIGKF--GANEYRGKLSPQITVSD 540 
WP_012861762     527 k-nSgK-------------------------KIEILYTP--VLKYGKNDFFIELKLKD 556  Sebaldella termitidis
WP_013387031     528 ---EeEyk---------------------llRFDIAYYP--EKVYYKGDETLQIRIKD 559  Ilyobacter polytropus
WP_023050126     531 n-nKdM-------------------------LYDIIYYP--EKIINKGEEFYQFRLKD 560  Cetobacterium somerae
WP_012858789     529 k-nSnK-------------------------LYKIIYTP--EL---MGKKVFRLKLKD 555  Streptobacillus moniliformis
WP_014296471     546 nitGnI-------------------------KCNIVGNFrvERTFYNNQKVLKFYVKD 578  Marinitoga
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