Conserved Protein Domain Family
BsuBI_PstI_RE_N

?
pfam17728: BsuBI_PstI_RE_N 
BsuBI/PstI restriction endonuclease HTH domain
This family represents the C-terminus of bacterial enzymes similar to type II restriction endonucleases BsuBI and PstI (EC:3.1.21.4). The enzymes of the BsuBI restriction/modification (R/M) system recognise the target sequence 5'CTGCAG and are functionally identical with those of the PstI R/M system.
Statistics
?
PSSM-Id: 496679
Aligned: 21 rows
Threshold Bit Score: 125.474
Created: 19-Feb-2025
Updated: 28-Apr-2025
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
WP_012561338   9 WKAIHARLPEIFPEGLQNRehsiwEIAAKTIFVMLYAGAVEGADRWIRPdqvtrmTdEQAALSDDDarHAWAKASIkpsk 88  Hyphomicrobiales
WP_015209824 532 TKRIDEALAIIKDLGLPRE-----QYNERSALVLLSFLDLRTADSWADA------K-APMRGITPV--MKFIAENY---- 593 Cylindrospermum...
Q6NDV9         9 WPQVHERLQLIFPEGAPHRansvwEIAARSVFVMLYVGAVEGNDIWIRPdqvtrmTdDQALRTSDAerIAWTKLSKkpsk 88  Rhodopseudomona...
WP_012735332   9 IALIAERLRQIFPEGTEHRnyvirEMAARTVYVMFYAGAIEGTDHWIRPsqvtgmSdEQAALVDDAsrLAWVKLSLsqkn 88  Burkholderia gl...
Q2RRF8        67 RDLIAARLPLIFPAGTPNRtycvrDLAASTVFAALYIGAVEGRGCFLGPvhvyrmTnEQALLADEAdrLAYGLAVLrkgg 146 Rhodospirillum ...
WP_011941781   9 VKEIHARLQSIFPEGSPNRnnctwEIAARTIFVMLYIGAIEGTDIWIRPdqvtrmTdDQSEQLSEAerLAWTKESVkssk 88  Acidiphilium cr...
1_pfamImport   1 EKNLEEAKEILASIGMPAK-----QQNTRTALVLLAMLDLRPDQEWAEV------S-SNTLGITEC--MDWMAVHYpdip 66 
WP_022316134  14 KNLVFNILDVFKLIGIPVDnt--dRKLERMAKACLAVGKIKKDFSEACS------FeDGFTRTRDI--IAFENEYL---- 79  Prevotella sp. ...
WP_013322838 380 EPKIEEALQILKAVGIPVDsq-tpKRKLRLALTLLAVANLKPESSWTEAcyw-qgTkSWALTTREI--IIFWNNNYle-- 453 Gloeothece verr...
Q8YQW1       232 AKRIEEALAILKDISAPKE-----QQNERSALFLLALADIRPEIPWTQA------T-SPRRRITEM--MDWFRDHY---- 293 Nostoc sp. PCC ...
WP_012561338  89 -advpGRWYAVNTRESIRDDTIRYaLIQNGAVIERp---GLSTTSPAGRYALQTDFADLLApgldeatfIAKAAAWRDKH 164 Hyphomicrobiales
WP_015209824 594 -----GRIYKPNTRETIRDETVAA-FVNAGILGKNpdkpDRPPNSPKTVYQIESAILALLQ--------TYETEQWNTNL 659 Cylindrospermum...
Q6NDV9        89 -eaapGRWYAGNTRESIRDDTIRNsLVPNNAVIERs---GLATTSSHGRYALDAAFAALFDpalsgppfEAAAAAWQASH 164 Rhodopseudomona...
WP_012735332  89 -wrpaTAWYAVDSREPVRDETLRSgLVSLRAVVERa---GVATTSSKPTYALEADFARLFNseltgealDKAIAAWRESH 164 Burkholderia gl...
Q2RRF8       147 -gisgSRWYADNTREPIRDETLRDgLVAIGAVIRRg---DLPTTSGQPRYALKAAFAALFDpaldgpalDAAIAAFQAAH 222 Rhodospirillum ...
WP_011941781  89 -geipGRWYAVNTRESIRDDTIRAgLIANGVVIERe---GLATTSPAPRYALASEFTKLLDpalsgkklTKAIADWQADH 164 Acidiphilium cr...
1_pfamImport  67 kgtkdPSRYAPNSRESVRKESVHQ-LIDAGVLVKNsdapGRATNDKNNRYHPSQLAIKALT--------TYGTSAWQESL 137
WP_022316134  80 -----GEDISSGSYDDIRRQDLKL-LVEAGIIVNSssteEQATNNPSRGYGLSTSFANLLH--------SFGSSRWEILL 145 Prevotella sp. ...
WP_013322838 454 ---vlGKPLSSGSYDDVRRKDLAL-LIPSGLVLRSaanpNASTNDPTRRYAVSEDAKDILL--------TFGTPQWQENI 521 Gloeothece verr...
Q8YQW1       294 -----GKQYAPNTRETVRRQTMHQ-FVQMGIVVENpdqpDRPINSPKWCYQLHQQFVTLLK--------SYGSEQWEETR 359 Nostoc sp. PCC ...
WP_012561338 165 LNAGALARIAIV 176 Hyphomicrobiales
WP_015209824 660 RDYLVSIETLKA 671 Cylindrospermum stagnale
Q6NDV9       165 LSVGARMRIAVV 176 Rhodopseudomonas palustris
WP_012735332 165 LSKAAISRLRLV 176 Burkholderia glumae
Q2RRF8       223 LSRSALARVAIM 234 Rhodospirillum rubrum ATCC 11170
WP_011941781 165 LNAGALARIAIV 176 Acidiphilium cryptum
1_pfamImport 138 DEYHAEWKKLIE 149
WP_022316134 146 NEFRKETKSLKE 157 Prevotella sp. CAG:592
WP_013322838 522 NAFREKYGVLAE 533 Gloeothece verrucosa
Q8YQW1       360 RNYVISVKNLLQ 371 Nostoc sp. PCC 7120
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap