4KYW


Conserved Protein Domain Family
DpnI_C

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pfam17726: DpnI_C 
Dam-replacing HTH domain
Dam-replacing protein (DRP) is an restriction endonuclease that is flanked by pseudo-transposable small repeat elements. The replacement of Dam-methylase by DRP allows phase variation through slippage-like mechanisms in several pathogenic isolates of Neisseria meningitidis. This domain represents the C-terminal HTH domain.
Statistics
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PSSM-Id: 496677
Aligned: 12 rows
Threshold Bit Score: 115.134
Created: 19-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4KYW_A         187 SSRGWTIEILNCIDKIEGSEFTLEDMYRFESDLKNIFVKNNHIKEKIRQQLQILRDKEIIEFKGRGKYR 255 Streptococcus pneumoniae...
WP_012857297   184 EQKGWILDIMACIEKLHKKQFTRQELLTFIPYLQTKYPKNNNIEFKISQQLQVLRDKGFLKFTARGNYE 252 Sulfurospirillum deleyianum
2_pfamImport     1 NNRGWLFDVLNCINEIPDKEFKLNDVYRFIEVLKEKHINNNHIEAKIRQQLQLLRDKGYIEFLERGHYR 69 
1_pfamImport     1 DSRGWLMDVLACVERLPNKDFTLNEMYLFTEELQAKHPVNTFIQPKIRQQLQRLRDKGYIEFLDRGHYR 69 
CCY65281       186 EKRGWMFDIIQCIERVPGINFCLNDIYAFSKELQIKHPENNFVKAKIRQQLQYLRDKGFIEFTKRGHYK 254
Q73N87         186 ESRGWLLDIIACIEKINTEEFSLNQIYAFENELKLKHPENNFIKDKIRQQLQYLRDKGFVKFLERGKYK 254 Treponema denticola
WP_021952735   185 DARGWTLDVLNCVNMIENKNFTLEQMYRFEEFLAGKHPDNHHIKEKIRQQLQMLRDNGIIEFIGRGRYK 253 uncultured Eubacterium sp.
Q5FAK4         184 ERKDWLLAVMKCIDQLT-EEFTLSQMYEFENKLSIQFPQNNHIKDKIRQQLQILRDQNMIEFIGRGLYK 251 Neisseria gonorrhoeae FA...
P0A460         184 SSRGWTIEILNCIDKIEGSEFTLEDMYRFESDLKNIFVKNNHIKEKIRQQLQILRDKEIIEFKGRGKYR 252 Streptococcus pneumoniae R6
EQB65564       201 SERSWRSEITLIVDKLP-SSFTLQDVYSQESNLRNLYPNNFHIRDKIRQQLQVLRDKGFIKFVGNGRYQ 268
WP_013559191   186 SQRTWLSLVLHVVDNLP-ANFSLQDIYKYEEKFIQYHPKNKNIRAKIRQQLQIARDLGLIKFLEPGVYQ 253 Anaerolinea thermophila
jgi:Calni_0428 187 ESRGWIIDILNCIDKIDKEIFSLQDIYKFESHLKLKHPNNNFIKDKIRQQLQLLRDKGIIEFLGKGKYR 255
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