5USD,4INJ,4EYS


Conserved Protein Domain Family
Peptidase_S66C

?
pfam17676: Peptidase_S66C (This model is not part of the current CDD release)
LD-carboxypeptidase C-terminal domain
Muramoyl-tetrapeptide carboxypeptidase hydrolyzes a peptide bond between a di-basic amino acid and the C-terminal D-alanine in the tetrapeptide moiety in peptidoglycan. This cleaves the bond between an L- and a D-amino acid. The function of this activity is in murein recycling. This family also includes the microcin c7 self-immunity protein. This family corresponds to Merops family S66.
Statistics
?
PSSM-Id: 522881
Aligned: 206 rows
Threshold Bit Score: 70.6074
Created: 19-Feb-2025
Updated: 28-Apr-2025
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
5USD_A        199 TGDIIGGNXSTLNLLQGTsY-----XPN---LKDKILFLEEdsltgtS---TLKTFDRYLHSLXQQQNFKHVKGIVIGkx 267 Bacillus anthr...
CDE67277      206 EGRLIGGCLDCLVNILGTkYdgtvdFVekykeDGFVWFLEAcd-------lNVFAIRRAIWQMEHAGWFQYVKGFLIGr- 277
CCZ89972      205 QGRLIGGCLDCLNNLVGTrFdhvaeFAnryreDGILWYLECcd-------lNVFDMRRALWHLKEADWFQNVKGFLIGr- 276
CDF07851      247 KGRLLGGCMDCLQNLIGTpYdrvkaFNeaygkDGIIWFLEScd-------lNVFDIRRAMWQMDQAGWFSNTAGFLIGr- 318
WP_013701425  210 EGIFLGGCLDVLANLCGTkLdsvkeFNlg--aEKIIWILEScd-------gNPTEIRRQVWHLKNAGWFEKASGFIIGr- 279 Treponema succ...
WP_021953171  203 SGRLLGGCLDVIAFLIGTkYdgtqqFVekykkDGIIWALESfn-------mEDVVLVTHLWQMKERGYFKYAKGFVFGr- 274 Eubacterium
CCZ03631      207 SGRLIGGCLDVLLFLQGTqYdgtqeFIekykeDGIIWYLESfd-------iSGENIMMFLWKLREIGWFKYTKGFMFGr- 278
WP_014804505  205 EGYSLVANLTTLMMTIATrW-----EpI---WQDKVLFLE-------EegqSTQITDRCLTHLENIGVFEKIKGIVFGrs 269 Turneriella parva
jgi:Sros_4304 215 TGTLLVGCLPVLRELAGTpW-----QPr---fAGRILVLETpql-----pyNMEQATSDLWHLRNMGVFKEIEALAIGrp 281
3_pfamImport    1 RSKVAGGNLTLVENSLGTsCcf--------rgVGKIVFLEDvr-------vQPYALERSLDHMKLAGVFDGATAVVFGsf 65 
5USD_A        268 ---qKGA--ECti------edIQEX-IAskPELAHIPIIANASFGHTTPIFTFPIGGRATI 316 Bacillus anthracis
CDE67277      278 ---pLQF--GQkfgeldqyraVTDL-L----GKYNVPIVMDLDIGHLHPAMPLIVGSYAKV 328
CCZ89972      277 ---pMHF--NEpmmgldqyeaVRGV-L----DEFDVPVLMDLDIGHMAPMMPLINGSVAHV 327
CDF07851      319 ---pLCY--GEemmgmdqyraILST-A----EKYKVPVIMDADLGHLPPAMPIVNGALAEI 369
WP_013701425  280 ---pLASl-GKeifginqynaVTDI-L----SEFNLPIIMDADIGHVDPAVPVAMGISAEV 331 Treponema succinifaciens
WP_021953171  275 ----PLM--YNswieqpykeaIMSI-L----GDLDVPVIFDADIGHKGPQFSIIEGALAKV 324 Eubacterium
CCZ03631      279 ----PLF--YKdftgtdyeeaVMYA-L----GKLDVPVIFDCDFGHRGPRMTMINGAIANV 328
WP_014804505  270 ygykVVD--SKypl----kriLRRF-GR----RYKIPVIANVDFGHSDPVLTLPQLIHVKV 319 Turneriella parva
jgi:Sros_4304 282 ysrdq---------aaalraaVLEV-V----APYSFPVLAELPCGHSSPILTLPLGIAATV 328
3_pfamImport   66 --svEEQpaGNcngvpssddhLMALvFRrfAATVLFPVFRVDGIGHSFVNNPLPLNTEATV 124
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap