Conserved Protein Domain Family
TssN

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pfam17555: TssN 
Type VI secretion system, TssN
T6SSs are toxin delivery systems. It is a multiprotein complex requiring numerous core proteins (Tss proteins) including cytoplasmic, transmembrane, and outer membrane components. The needle or tube apparatus is comprised of a phage-like complex, similar to the T4 contractile bacteriophage tail, which is thought to be anchored to the membrane by a trans-envelope complex. TssN proteins have multiple predicted transmembrane (TM) regions. In Flavobacterium johnsoniae, three specific components (TssN, TssO and TssP) are absent in the other sub-types of T6SS.
Statistics
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PSSM-Id: 496606
Aligned: 16 rows
Threshold Bit Score: 246.393
Created: 19-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
KGN81284      10 FIRYLLIPLIVVGMAFVLGYMKKKAGALKNKTLIIYILVSALCIAIVGFLGF--SGNMFAPYWYLIAMIIYLFMGILNVN 87 
GAO31053       2 LTFYLLWPIVGLILLISGVFIAKKIKISNRKKLLLYILVALLLMTAPALSGF--LHVNFMPHAYLLIALYAGILGYINIT 79 
WP_008245078   7 FTRYLLFPIIFVVSAAALSVVNKKNQFLNNKKLILSILVMGIALALPGLLGF--LSFDFMPWGYIICQLYFLLTGSFAVF 84  Pedobacter sp. ...
WP_021582775   8 FLKFLLAPLLAMLLLFITSALKSIRQKLSMKKVIIFSLLAGLCLGLPSLFGL--LRNEFVWGGLILTVISYLLLGIFFLF 85  Hoylesella pleu...
CCB70786       8 FLKYLLAPFLILIISFIMGQFSA--IKVKIKSAIIFVLCFSILIAITSLFAF--FNNEFIWFGLLFSILYYILLGIGLLY 83 
WP_039112680  15 IVFLVVIIAVSVILTMVFSDKIKEFAVKYKKKFYIYIFSFVLIYALVAFLGYnkLFTELS-DEFLFYQIASLLFGCLHVY 93  unclassified Fl...
WP_066318894  10 FKLSIILFLVSSLLM-LLVSKVRKTFSKNKVQAIIYIIILLVLFALTGLLNYdkILNDSPLNSYVGTELIFFILGIGHIF 88  Aquimarina
WP_068592045  13 LKLSILFLVVGSILM-LLMTSIRKMFTKNKKRAILYVLFILLTFALTGLLSSskVLNDTPLNSFFGFQFIFLLLGILHIY 91  Cochleicola gel...
WP_013870883  13 FKVSLGLFFISSIIM-GLMKKIRTVFAKNKKAGILYLLFIIVTFALTGLLSSsfVLNDTPLNSFIGIQIIFLILGILHIY 91  Lacinutrix sp. ...
WP_056067929  14 LVYIFLAIAVAMIISMFIGMKTPKFRQ-EKKSYFIYILCQGLMLLVFGAILFn-LKDTTVNIRFISFQVYLLIAGAIHLT 91  Flavobacterium
KGN81284      88 mLHKYIKKNNKNQTfsILFESMITLTSMLLGGYLFYHLFNMMSAFDgYGFMAATSIFVYIVPLSFYYTYLQFVNIPLAIY 167
GAO31053      80 vIHNLFNDKQHYGK-----DIFLFLLILLPAYCLFVLIFNLTNELQ-YGVWAGSSLLAFIFPSLYSKTHALFVTIPAEVF 153
WP_008245078  85 lLTKYYPKELIERK---FFIFFSLLISCLLSFYLFQLAFNWLSEIR-FGLWAATSIAIVIVPFFFWWAYVALISIPTEIY 160 Pedobacter sp. ...
WP_021582775  86 -ALKSFMGDGTKDPd-ETISVLLILISGIVGMWIYYIVFDLLSGELpYTVWAMTTVLWFAIPFSVYCCFKLFCEIQPPIY 163 Hoylesella pleu...
CCB70786      84 yMNTNFFKGIGIMEs-LLGKFFIFLIVTILSCWIYYLVFNLIAISS-YVHYIMFTILWVFVPFLFSELKQKYVAIPYPFY 161
WP_039112680  94 -LYRWYFEEFSMKS--VGIELLFSLLIILYSSVLFIIIYTALNGIG-LTFLMCSHFLVFIVPTGIYAVFNYMMQIPPKEY 169 unclassified Fl...
WP_066318894  89 -VLRTYFKELSETKsdFFGEVVCTLVFVGIALLAFVYVVGRFREPFvFLY--ASAGLTFIIPLLTLKMYEFAALIPVPVY 165 Aquimarina
WP_068592045  92 -IMRKYFEDLSKKKsdYFSEFLFTIAFACIGLFAFFNVVGYFRPLLsFTF--LAAGFCFIIPIMVYKFYEFATLIPIPVY 168 Cochleicola gel...
WP_013870883  92 -VIDKFFPDLTKDKsgIFHELLFTIIVLCLGLIVYLNVVNRFRPSFsFTF--LGASIVFLIPFLFNKLYKFAYNIPVSVY 168 Lacinutrix sp. ...
WP_056067929  92 -FFHLYFKQFDAKE--IYKEIFIAIVSGIFMEAFVIMLVGHFQELP-YMYYYLGAMLFFLIPTLCFCLFRTAISIPAKLH 167 Flavobacterium
KGN81284     168 DTWTPVLE-ENPISFDNVDFNKLRVLNIELYKNIEDKNRFRIKAKAlDSGVSFGDWFFRLVSEYNHRNPNEIICLKDKDn 246
GAO31053     154 KIWYYKSK-EDDLDGLDIDYHSLIVLEVELMKRKGDTYPARIKAKA-PDQMPFGIWFKRLITDYNIKSPLSPIKHYSDN- 230
WP_008245078 161 KVWQYPSS-PLIIDMDHLDFDRMLVLELELYKNTDDPEPLRVKVKA-PENMVFGPWFYKFIEDYNLKFPKNPVQYRTDHq 238 Pedobacter sp. ...
WP_021582775 164 ALWMSNHSvFNRNYWDTFDNFKSKTVRVRIKRKTSDQNYTMLSVRL-SDGISLGDWFDWMVEDQNKRFPQAKIDTRMDD- 241 Hoylesella pleu...
CCB70786     162 QSWKVGTGrTDNEYWDNIDKFHLMQVSIKIKKRSDSEFFSKFDVKI-AQEVNLGSWFDKFIEDQNYRFPNDAIETNATD- 239
WP_039112680 170 VTWRIPKGkNPFPEIDGVEMKDLLLITLLIQKKPDSATYTSLRSKG-PVRIDFGNLFYHTVSGYNDHNAESIIDL-DQNg 247 unclassified Fl...
WP_066318894 166 KKWFYPIN-KDIKEPKSSELNNPLVISFQFEKKYGDKEISRFKVKA-PEEMEFGRLFYFFVDDYNELHPEDKIDILEKDg 243 Aquimarina
WP_068592045 169 KKWLYPLN-ENIKDPTSKELENPLVISFEFQKKEELSDITNFRVKA-PEAMEFGKLFYFFINDYNERHPESKIAFLDANs 246 Cochleicola gel...
WP_013870883 169 NKWIYPLD-NSIKEPTKNELTNPAVISFEFQKNNDDKDITNFRIKA-PENMDFGKLFYFFINDYNERHPESKIEYLNPAt 246 Lacinutrix sp. ...
WP_056067929 168 KRWFYPVN-SKYPAPHISEMRNIIIVNLVFTKKANDSTIINFKVKA-PRAFDFGKLFYYFINDYNEKNPNSQVRYLDDKn 245 Flavobacterium
KGN81284     247 -EPYSWIFYVKKSFFHQRRYI---DFEQDVEKNRILENSIVICKRV 288
GAO31053     231 -DDLGWIFYFKPSILRPRKYI---DCDRTFQSNKIKERNTIIAKRV 272
WP_008245078 239 -EAYQWIFFIKTSFFKKNIFI---DPDLDILKNGITEKMTIYAKRV 280 Pedobacter sp. BAL39
WP_021582775 242 -PESGWIFY-TSKWFKYPLFIrmlDPKLTGIENGIKKDQIIYIKRV 285 Hoylesella pleuritidis
CCB70786     240 -ENMGWIFY-TPKYFKFPLFIrnlDPTKPIAESNIKNKQVIFAKRV 283
WP_039112680 248 -ENYNWVFFLQPKWYQSAKYV---DAKYTLGMNGITENSVIICKRQ 289 unclassified Flavobacterium
WP_066318894 244 -SVTGWIFYFKPRWWNSIRHI---DANKTVQWNKIREDNNIVVQRV 285 Aquimarina
WP_068592045 247 qQPQGWIFYVKPKWWSGIRHI---NFAKTIAGNNIREDNVIVCQRI 289 Cochleicola gelatinilyticus
WP_013870883 247 mQPQQWIFFFKPNWLGNLKHI---DYNKTVSHNNVKENDVIVCQRV 289 Lacinutrix sp. 5H-3-7-4
WP_056067929 246 -QPYGWYFYTKPKWFSSSDYI---DPELAIDTNNIKDGATIICQRI 287 Flavobacterium
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