2PSB


Conserved Protein Domain Family
DUF3048_C

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pfam17479: DUF3048_C (This model is not part of the current CDD release)
Protein of unknown function (DUF3048) C-terminal domain
Some members in this bacterial family of proteins are annotated as YerB. However currently no function is known. This entry represents the C-terminal domain.
Statistics
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PSSM-Id: 522841
Aligned: 113 rows
Threshold Bit Score: 61.472
Created: 19-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2PSB_A        184 VRVDY-GTNNVtnlVEYNYDKKAEFYTRSSDGVITTDrETGKPVAXQNIFIVEAS-HHIidqd----grrDIDLEsGGKG 257 Bacillus subtilis
WP_010831997  205 LSAAFg-------gHTTTWQFQGGKYVNTNSy-----aADGDDFPATSILSLRVRiGDAgyrdpagylvpETKFEgSGPA 272 Nocardioides
WP_011754748  220 IAAVFgg------gHTTNWTFDGKGYVNENTy-----aADGDEFPADTVLVLRVTvGDAgyrdpagnpvpETKLEgKGEA 288 unclassified N...
2_pfamImport    1 LVAHFpSLVAS-------YNWTGSRWQRVDGGTAASAr-SGAPLQTDNVVVVLTSiIDTgakdaagatvpETVLTgSGTA 72 
WP_013882769  236 LAFRL-SAAAS---PTWTWQSSSRTWLRSEGSSPAVAr-SGERLAATNVVSIVANhPDTrypaqggarvpTYDLVgSGTG 310 Cellulomonas g...
WP_013770086  232 LEVRM-SGYSR---PRWTFDTASGTWLRSEGDTPATAr-SGARLAAANVVALEVRlVDSgtkdpagnpvpETVLVgSGEG 306 Cellulomonas fimi
jgi:Bcav_3246 211 IVTAFpSSR-----PSWAWSADAGRWLRSEGDSAAVSa-AGEQLSAANVVVLRVQvQDTgtldpggnpvpETVMTgQGEG 284
WP_012877235  224 VAVTM-SRGQR---SVWDWNAERGVYELSNGATPSVSt-SGARHSANNVLLIGAQmHNTpwldpagtpvpETVLVgSGEG 298 Xylanimonas ce...
WP_014742037  172 LALTL-SPSSH---PNWTWSPPDGRWVRDENGTPAVEa-DGTPMRATNVVVLRVDvVVTdgrdpagnpvpETVLQgRGEA 246 Modestobacter ...
WP_012949736  256 LELTL-SGVSH---PRWTWSAADGRWLRSEGSTPAVEa-DGRRIGATNVVVLRVDvVATeardpagnpvpETILTgTGRA 330 Geodermatophil...
2PSB_A        258 LLFQHGNVIETDWKQ--VNGRIVPV-KDGKWLPFVPGKTWI 295 Bacillus subtilis
WP_010831997  273 QLFHDGQVVQGTWTKdgLTGAIKLEtKKGDELTVPAGHVWI 313 Nocardioides
WP_011754748  289 MIFHGGRLVRGTWKKtgLDAPITLStKAG-ELEVPVGHTWI 328 unclassified Nocardioides
2_pfamImport   73 YVASGGSVAKVTWSKdsEGSPLQLTdSAGEPVLLNRGTTWI 113
WP_013882769  311 TIATGGRTIEVTWKKaaQDKPLRLFlPGGEPALLAPGNTWV 351 Cellulomonas gilvus
WP_013770086  307 VVVSQGRSLAVTWSKtsTDAVLTLAaPDGSPVALAPGVTWV 347 Cellulomonas fimi
jgi:Bcav_3246 285 LVAAGGQTVAVTWSKedTASPLRLTdADGNDVQLVPGNTWV 325
WP_012877235  299 LLASGGKSVPVTWSKesTAALLVITdADGAEVQLEPGTTWV 339 Xylanimonas cellulosilytica
WP_014742037  247 LLATGGRTMPVTWVKngVADRLVLLgPDGNPVRLAPGSTWV 287 Modestobacter italicus
WP_012949736  331 LVASGGHTVEATWSKpaTGDRVTLTrADGAPVTLPPGTTWV 371 Geodermatophilus obscurus
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