6VN1,3FVC


Conserved Protein Domain Family
Glycoprot_B_PH2

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pfam17417: Glycoprot_B_PH2 
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Herpesvirus Glycoprotein B PH-like domain
This domain corresponds to the second PH-like domain in herpesvirus glycoprotein B.
Statistics
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PSSM-Id: 407490
Aligned: 12 rows
Threshold Bit Score: 137.082
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6VN1_B 371 LVKWREVEDVVRDEYAHNFRFTMKTLSTTFISETNEFNLNQIh------LSQCVKEEARAIINRIYTTRYNSSHVRTGDI 444  Varicella-zoster virus
P28864 292 LKHWTTVTHGLRAETNETYHFISKELTAAFVAPKESLNLTDP-------KQTCIKNEFEKIINEVYMSDYNDTYSMNGSY 364  Human herpesvirus 6 ...
Q6UDK4 332 MAKWLEIPEAVRVSYNKSFHFNFKDLTATLVASKTPFNISRLh------LGGCVPRIANETIEAIYGKKYKNTHVRSGGI 405  Psittacid herpesviru...
P27171 359 WKKWQTVSRAIRTDTNTGYHFVSKGLTATFVASKRKIDYNTTtegknynTFRCVYDEFVEEVNRVFEDEYNETHVKDGEL 438  Murine cytomegalovir...
Q77MS3 300 MTKWKEVTEMLRATVNGRYRFMARELSATFISNTTEFDPNRIi------LGQCIKREAEAAIEQIFRTKYNDSHVKVGHV 373  Marek's disease herp...
P08666 361 MTKWQEVDEMLRAEYGGSFRFSSDAISTTFTTNLTEYSLSRVd------LGDCIGRDAREAIDRMFARKYNATHIKVGQP 434  Human herpesvirus 2 ...
3FVC_A 275 LQHWQTFDSTIATETGKSIHFVTDEGTSSFVTNTTVGIELPD-------AFKCIEEQVNKTMHEKYEAVQDRYTKGQEAI 347  Epstein-Barr virus (...
O36362 317 WAHWKSFDNAIKTEHGKSLHFVANDITASFYTPNTQTREVLG-------KHVCLNNTIESELKSRL-AKVNDTHSPNGTA 388  Alcelaphine herpesvi...
Q66613 308 LILWKGFSNAIQTQHNSSLHFIANDITASFSTPLEEEANFNE-------TFKCIWNNTQEEIQKKL-KEVEKTHRPNGTA 379  Equid herpesvirus ty...
F5HB81 317 LALWKTFPRSIQTTHEDSFHFVANEITATFTAPLTPVANFTD-------TYSCLTSDINTTLNASK-AKLASTHVPNGTV 388  Human herpesvirus 8 ...
P24905 293 MVFWKSFQRAIQTEHDLTYHFIANEITAGFSTVKEPLANFTS-------DYNCLMTHINTTLEDKI-ARVNNTHTPNGTA 364  Herpesvirus saimiri ...
F5HB53 346 LTFWEASERTIRSEAEDSYHFSSAKMTATFLSKKQEVNMSDS-------ALDCVRDEAINKLQQIFNTSYNQTYEKYGNV 418  Human herpesvirus 5 ...
6VN1_B 445 QTYLARGGFVVVFQPLLSNSLARL 468  Varicella-zoster virus
P28864 365 QIFKTTGDLILIWQPLVQKSLMFL 388  Human herpesvirus 6 (strain Uganda-1102)
Q6UDK4 406 EYYLANGGFLIAFQRLVSNDLAEL 429  Psittacid herpesvirus 1 Amazon parrot/1997
P27171 439 EMYRTTGGLIVLWQGLKAKSLHNL 462  Murine cytomegalovirus (strain Smith)
Q77MS3 374 QYFLALGGFIVAYQPVLSKSLAHM 397  Marek's disease herpesvirus type 1 strain MD5
P08666 435 QYYLATGGFLIAYQPLLSNTLAEL 458  Human herpesvirus 2 strain HG52
3FVC_A 348 TYFITSGGLLLAWLPLTPRSLATV 371  Epstein-Barr virus (strain B95-8)
O36362 389 QYYLTNGGLLLVWQPLVQQKLLDA 412  Alcelaphine herpesvirus 1 strain C500
Q66613 380 KVYKTTGNLYIVWQPLIQIDLLDT 403  Equid herpesvirus type 2 strain 86/87
F5HB81 389 QYFHTTGGLYLVWQPMSAINLTHA 412  Human herpesvirus 8 strain GK18
P24905 365 EYYQTEGGMILVWQPLIAIELEEA 388  Herpesvirus saimiri (strain 11)
F5HB53 419 SVFETTGGLVVFWQGIKQKSLVEL 442  Human herpesvirus 5 strain Merlin
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