Conserved Protein Domain Family
LBP_C

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pfam17386: LBP_C 
Lacto-N-biose phosphorylase C-terminal domain
The gene which codes for this protein in gut-bacteria is located in a novel putative operon for galactose metabolism. The protein appears to be a carbohydrate-processing phosphorolytic enzyme (EC:2.4.1.211), unlike either glycoside hydrolases or glycoside lyase. Intestinal colonisation by bifidobacteria is important for human health, especially in pediatrics, because colonisation seems to prevent infection by some pathogenic bacteria that cause diarrhoea or other illnesses. The operon seems to be involved in intestinal colonisation by bifidobacteria mediated by metabolism of mucin sugars. In addition, it may also resolve the question of the nature of the bifidus factor in human milk as the lacto-N-biose structure found in milk oligosaccharides.
Statistics
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PSSM-Id: 496543
Aligned: 25 rows
Threshold Bit Score: 56.1237
Created: 19-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
jgi:Oter_1377 689 WSSSNVKTEATVFPKAGKLVVINNAGTDEETVVTLGDGKTTKrVKLEAHGIAIL 742
WP_015357751  674 WTCGNFNTECAYFPNSRRLVVINNGENRETTVINDDKGNRIE-VSLEPYAVKIL 726 Thermoclostridium stercorarium
CDD64634      662 YITDNPYTECAYYPASNMLVIINNSGETQTASVKTEAGVKS--ATLEAYDTAII 713
A9KHK4        668 GITNNVYTECAYYEKDKILVMINNSNTLQESSVTI-KGRTYT-KDIPAFDTVIL 719 Lachnoclostridium phytofermentans ISDg
CDF45196      666 YLTDNADMECAYYPESRTLIVINNTDSVQETTINTEFGTEK--IKLEAFDTLIK 717
WP_013369533  665 YITDNLYTECAYYPESKMLVVINNSDQLQRTTIETDYGKQT--MELEPYDTMIT 716 Paenibacillus polymyxa
CDB99194      660 YLTDNVNTECCYYPEGKQLVVINNADTEQTATVKTDAGDKT--VTLSAFDTQIV 711
WP_014759793  696 YSSSNPECEVAVFDKSGCYCVVNNTDRAQSTYVERGDGRIER-IELAPSGIAWR 748 Bifidobacterium bifidum
jgi:Arch_0013 690 WSSSNPDCEVAHYPEKRLIAVVNNTEIEQTTTVTLDNATRE--LTLPGSGIEWI 741
WP_012858194  657 YISDNIYVE--AYEFNEYIAVINNSDKNIKTNITALGN-----IELERYELKWI 703 Streptobacillus moniliformis
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