Conserved Protein Domain Family
NiFe_hyd_3_EhaA

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pfam17367: NiFe_hyd_3_EhaA (496534 is an unknown moldel)
NiFe-hydrogenase-type-3 Eha complex subunit A
Energy-converting [NiFe] hydrogenases are membrane-bound enzymes with a six-subunit core: the large and small hydrogenase subunits, plus two hydrophilic proteins and two integral membrane proteins. Their large and small subunits show little sequence similarity to other [NiFe] hydrogenases, except for key conserved residues coordinating the active site and [FeS] cluster. Energy-converting [NiFe] hydrogenases function as ion pumps, catalyzing the reduction of ferredoxin with H2 driven by the proton-motive force or the sodium-ion-motive force. Eha and Ehb hydrogenases contain extra subunits in addition to those shared by other energy-converting [NiFe] hydrogenases (or [NiFe]-hydrogenase-3-type). Eha contains a 6[4Fe-4S] polyferredoxin, a 10[4F-4S] polyferredoxin, ten other predicted integral membrane proteins (EhaA, EhaB, EhaC, EhaD, EhaE, EhaF, EhaG, EhaI, EhaK, EhaL) and four hydrophobic subunits (EhaM, EhaR, EhS, EhT). Eha and Ehb catalyze the reduction of low-potential redox carriers (e.g. ferredoxins or polyferredoxins), which then might function as electron donors to oxidoreductases. Based on sequence similarity and genome context analysis, other organisms such as Methanopyrus kandleri, Methanocaldococcus jannaschii, and Methanothermobacter marburgensis also encode Eha-like [NiFe]-hydrogenase-3-type complexes and have very similar eha operon structure. This domain family can be found on the small membrane proteins that are predicted to be the EhaA trans-membrane subunits of multisubunit membrane-bound [NiFe]-hydrogenase Eha complexes.
Statistics
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PSSM-Id: 496534
Aligned: 6 rows
Threshold Bit Score: 79.4317
Created: 22-Aug-2024
Updated: 4-Dec-2024
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_016358544   1 MIYLISETSLLLNYLITIIVSIAVALLLGMPFLP-EKPRRFSWTKSAVFPTAIIAMGILSFCFS-INFYwLYDGKLLAII 78  Methanobrevibac...
WP_012956211   2 ISIGANGFQLLINYIVAIVVAVIIAFALRLPLLP-ERPIRFSWTTSALFPTPIFAIGILAIFYS-LNVYwIYDGLILSVI 79  Methanobrevibac...
Q57948         5 NSLLVRVMDIIILYLIALITSVIVALVLKLPIIPkEKPIRFSFETSIIFPTPILALGIEAIFRNlFGDY-----ISLAFF 79  Methanocaldococ...
O26484         1 MIIHVT---YLSGYLAAIISSIIVSAILGLPLTP-ERPARHSWTPSAIFPTPVIALGLTAISIK-LGVT-GIYGADLGAV 74  Methanothermoba...
WP_013644883   1 MIIHANVI-LISSYAVAVISSIVVGLLLRIPLLP-ERPMRQSWTISIVFPTAVLALGFSAMVFK-LGVD----GLLVAAI 73  Methanobacteriu...
WP_023992245   1 MIIHAN----VISYLIALAAALILGIILRLPLLP-EKPMRQSWTISAVFPTAILAIGFYAMVYK-LGYQ----GYIVALI 70  Methanobacteriu...
WP_016358544  79 IGVLSAVFVKYLFRYVFPDS 98  Methanobrevibacter sp. AbM4
WP_012956211  80 VGLASALFVKYGFDYIFPKP 99  Methanobrevibacter ruminantium
Q57948        80 AGLFGALLSKYA-DKLFGEP 98  Methanocaldococcus jannaschii DSM 2661
O26484        75 AGVLSAIMTAYFLEDIFPRP 94  Methanothermobacter thermautotrophicus str. Delta H
WP_013644883  74 IGIITALFSKYILERVLPEP 93  Methanobacterium lacus
WP_023992245  71 TGIITALFCKFILEKVVPVP 90  Methanobacterium sp. MB1
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