3EZK,4DKW


Conserved Protein Domain Family
Terminase_6C

?
pfam17289: Terminase_6C (This model is not part of the current CDD release)
Terminase RNaseH-like domain
Statistics
?
PSSM-Id: 522795
Aligned: 24 rows
Threshold Bit Score: 102.462
Created: 19-Feb-2025
Updated: 28-Apr-2025
Structure
?
Program:
Drawing:
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
3EZK_A       398 ATLDCSe------gRGQDYHALHII-DVTDDVWEQVGVLHSNTISHLILPDIVMRYLV---EYNECPVYIELNS------ 461 Tequatrovirus T4
Q7VTW6       253 IGMDFN--------VLNMTATVNVI----RAGLPLTVGELTKVRDTPEMARMLKERFKdkgHGVTIYPDASGGNtss-kn 319 Bordetella pert...
Q8TJF9       320 RWWDTAatepssenKDPDWTAGLLM--GELDGRFYILDLKHDRKSPAGVEEMLKTTAEtdgKEVDIGMEVEPGS------ 391 Methanosarcina ...
2_pfamImport   1 RAWDLAatlpseinPNPDWTAGVKMgKSKKDGCYYIIDVVRFRDRPSGVETQINLTAEsdgKRTGIFIPQDPGA------ 74 
Q835C2       319 QSWDCTfk----dtETSDYVSGQVW-GKKRADFYLLDRHHERMGIVETMKAIDAMAAK---WPKARGIYIEDKA------ 384 Enterococcus fa...
P17312       398 ATLDCSe------gRGQDYHALHII-DVTDDVWEQVGVLHSNTISHLILPDIVMRYLV---EYNECPVYIELNS------ 461 Tequatrovirus T4
1_pfamImport   1 LTVDTSe------gRGQDYHALHMI-DVTSYPFEQVAVFHDNKTSHLLLPAIIMKQAY---RYNEAYVYCEIAS------ 64 
O50924       282 MYIDPAf------sVGGDNTAICVL-ERTFEKFYAYIYQDQKPVSDSLMLASIQVLIE---NFNVNTVYIEERDstk-gd 350 Lyme disease sp...
Q9S0A3       282 AYLDPAf------sVGGDNTALCVM-ERVDDKYYAFVFQDQRPANDPYIMNMVKTVIE---NFNVHTLYLEDRDntkgag 351 Lyme disease sp...
Q9PQX4       282 GGMDWGdgt---ssSSSDTACLFGS-ISKENGIEILDEMVYNNNVNPLTSEQQIELVVrwfIKKQQEVNVKIVIyid-na 356 Ureaplasma parvum
3EZK_A       462 TGVSVAKSLYMDLEye-------------gVicdsytDLGMKQTK--------RTKAVGCSTLKDLI---EKDKLIIHHr 517 Tequatrovirus T4
Q7VTW6       320 ASESDLSILRKAG-----------------F------TVRVNSRN--------PSVKDRINAVNGMLlndEGARRWLVNt 368 Bordetella pert...
Q8TJF9       392 AGKREADRLKRTIFs--------------gY------TFRGERST--------GDKVTRAKPFSAAC---ENGLVYVVRa 440 Methanosarcina ...
2_pfamImport  75 AGKSYATSLIRKLAek-------------gY------RARAKPTN--------KDKVTRFAGFSAAS---EAGLVKVLRg 124
Q835C2       385 NGTAVIEMLKNELSg--------------iI------AVNPE-----------GGKEVRANAVAPIW---EAGNVYLPHp 430 Enterococcus fa...
P17312       462 TGVSVAKSLYMDLEyegvic-----dsytdL------GMKQTK----------RTKAVGCSTLKDLI---EKDKLIIHHr 517 Tequatrovirus T4
1_pfamImport  65 TGELVMNELFRDLEyenvimeerasggrrgL------GLKPNK----------KTKAIGCSTLKDLI---EKDQLKINHi 125
O50924       351 GILTKTILFLRNKSsh-------------yF------KVAPI-----------KPLSNKFKRICALIplfESRKIEFLKi 400 Lyme disease sp...
Q9S0A3       352 GLTREYILLRSNIsq--------------yF------RIVPV-----------KPKSNKFSRITTLItpfTYKKLYITKy 400 Lyme disease sp...
Q9PQX4       357 HLRYFYETFNATFKri-------------aF------QYNMYGSElvfapaikHAIWDRVVLVNYML---ASGKLRFSKn 414 Ureaplasma parvum
3EZK_A       518 ---------aTIqefrtfsekGVSWAAEEGYHDDLVmslvifgwlSTQSKFIDYADKDDMRLAS 572 Tequatrovirus T4
Q7VTW6       369 ---------dRC---------PTLTEALEQQVYDKNge------pDKSTGHDHPNDAQGYFLVH 408 Bordetella pertussis
Q8TJF9       441 ---------pWN---------HEYLNDLINFPNPKY--------------HDDCVDVSSAAHEY 472 Methanosarcina acetivorans
2_pfamImport 125 ---------sWN---------EAYFQELEGFCGDGK-------------TKDDQVDATSDAFNS 157
Q835C2       431 lv------cpWV---------DDFINELVAFPN---------------AEHDDDVDSMTQILNK 464 Enterococcus faecalis
P17312       518 atiqefrtfsEK---------GVSWAAEEGYHDDLVmslvifgwlSTQSKFIDYADKDDMRLAS 572 Tequatrovirus T4
1_pfamImport 126 ptlkefhtfvEK---------GKSWEAEEGFHDDLVmsltllaylSTQDRFSDFVEK------- 173
O50924       401 ----------IS---------KNVISDIYSYKGDGK-------------TKDDALDSLANAYLL 432 Lyme disease spirochete
Q9S0A3       401 ----------SS---------SSVFNDIYSYKGDSK-------------THDDALDAMSAAYLM 432 Lyme disease spirochete
Q9PQX4       415 ----------AC---------PKLYKDLKNCYVVLPktikedtkkERSHEHTHTINALEYLMCA 459 Ureaplasma parvum
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap