Conserved Protein Domain Family
Pom

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pfam17251: Pom 
Protochlamydia outer membrane protein
This family represents an outer membrane protein found in environmental chlamydia. The protein shows porin function.
Statistics
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PSSM-Id: 435813
Aligned: 6 rows
Threshold Bit Score: 289.04
Created: 19-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q6MC98        31 EVGFGYRRDELKWKTRTgldssDSGysaaspfGAQSTLKWKNLNIWQIEARGEYvTCDNVYLRASGDYGWIVSG--KNRD 108 Candidatus Prot...
Q6MA15        29 EMGVGWRRDKLNWKLKNieldqISG-------NVDSHIQFKKLELYMAYAKAKW-IGSKYYVRLSADYGTSFKG--EARE 98  Candidatus Prot...
Q6MB36        28 TFEVGYRHDDISWN--------QKApsy--npNYKLHRKFKDLDIVQIGLKGRTmLGYNFYGRASVNWGWIVDGdyKRTF 97  Candidatus Prot...
Q6MCV5        29 KLTNGYRSDSLNTQRKF-----LKAyepsfsnD---QLKLRSISLYQVGFKANLcLLS-LFVHLDADYAWAGSGgwKEIQ 99  Candidatus Prot...
jgi:Q7C_258   66 YFKAGYRRDDLVWS--------IAGpgg--rpNILSELTWKDIEIATLNLGATLqMRNNWFVTGDAVWGEIVNG--ENQD 133
WP_013924546  27 KIGAGYREDRFRWS--------ISApgg--npDVLSELTWKDLCSYNLMGTGKIsICS-ITARFKGDYGKIYHG--QNRD 93  Parachlamydia a...
Q6MC98       109 SDYi--nAGEESQLEISRTHAKT----RGHVYDVDVALGYQFKLCDD-----SFSVTPVVGYSWKGQHLKdrhlrfatsp 177 Candidatus Prot...
Q6MA15        99 HFQldtpLLNKDILVNTHDPIKK----RSEVYDFDIATGYPLSFCYG-----RLNVVPLIGFSFHRQHLR---------- 159 Candidatus Prot...
Q6MB36        98 STYkspvIAGFGSEDFVVTDTRRdvidENFVYDLSIGVGYPFYFSDC-----TLALSPVVGYALDSQHIS---------- 162 Candidatus Prot...
Q6MCV5       100 HLY---------SQQHARFESSKl---KGMTKDAILGVGYQFNLIPFy---rLITLRPMLGWSYHEQHFK---------- 154 Candidatus Prot...
jgi:Q7C_258  134 SDY----FENNRREEFSRSNNGAd---EGNVLDFSVGFGYRYQWLFNeagtaGFELRPKLGVAYHSQDLK---------- 196
WP_013924546  94 SDY----LESGRKQEYSRSINDAg---KGEVFDLSAAIGFQTTWFCQ-----MLKIIPLAGWSHHELHLR---------- 151 Parachlamydia a...
Q6MC98       178 igesssssglLRASSDYYDYSSSSSSSSSSN-------------------------------FHNRYNTRWNGPFVGVDF 226 Candidatus Prot...
Q6MA15       160 ----------VKGKKDSSSSSSYFSPISSSNplygndsnpfvkpssdsnpiianklglnvsrRTSTYRFNWYGFYLGTDI 229 Candidatus Prot...
Q6MB36       163 ----------VEQGGLGFDSTGAVNPNSYGS-------------------------------YTHKFNSRWYGPFVGVDF 201 Candidatus Prot...
Q6MCV5       155 ----------TSHIKARINDVSKTA--------------------------------------NLGYSNHWEGPWAGINL 186 Candidatus Prot...
jgi:Q7C_258  197 ----------IVDGRQTILNSEP-VSIRFPG-------------------------------LRSSYDTSWFGPWVGLES 234
WP_013924546 152 ----------QFHGRQTIDFDG--EPGKISN-------------------------------LHSNYRAKWDGPWVGGDL 188 Parachlamydia a...
Q6MC98       227 -DYRISCDLELFLDYEFH-F-AKYHAKADWKLRNDLPNgf---hHRSKSS-----QGHVLDFGVKWDLDECWTLALKgg- 294 Candidatus Prot...
Q6MA15       230 -AYALDKEWTLYAELEAHcLdSCHRKRKSWTGVYFVDHy-----HRNRWA-----WGFNTNLGTTFCLSNCWYGKISld- 297 Candidatus Prot...
Q6MB36       202 nYRPYGETWNLYAEVEYH-F-ARFKGRYHDELLSqh------hiHRSKHA-----HAWTFALGADYDFSNDWTAGLCvk- 267 Candidatus Prot...
Q6MCV5       187 --KGFLDEFSIDLGYEYH-W-------GNWQSKKNIHGlqalkdQLARKGwskhtHGQVFYIDATWHFNLCWYIGLGlk- 255 Candidatus Prot...
jgi:Q7C_258  235 -VFFQTGKFSLGLNVEYH-Y-IDYDATAEWNLRSDFAQpes-feHEA-DG-----YGWVTELRSQWHFTPDLALTLDlq- 303
WP_013924546 189 --FCYLGSWTLYGTFEYH-W-AHYKGQGHWNLRWDFLKdf---rQKA-HA-----TGTFYTLGTQYQFDCGWLIGLEgnf 255 Parachlamydia a...
Q6MC98       295 ---iQYFHARRGHDRSlvtktevgnvdtkcfvsiplrdvKWCSGSVTFDVGMAF 345 Candidatus Protochlamydia amoebophila UWE25
Q6MA15       298 ---yKWLKSHTRKDEL-----------------------KWESVGINAALSHSF 325 Candidatus Protochlamydia amoebophila UWE25
Q6MB36       268 --fqDWTASRRHGHHGhvssnssdeii--nlsgnertshKWNSYAINLTFGKQF 317 Candidatus Protochlamydia amoebophila UWE25
Q6MCV5       256 --lqEWKVAQEKLKSPnesvln-----------ekshhtAWRSFAATIDIGFGI 296 Candidatus Protochlamydia amoebophila UWE25
jgi:Q7C_258  304 --fqKWLADRRGKDTTylvdgtel--------ttkfnevEWDSYGVSLGLNYVF 347
WP_013924546 256 lrmnTW----HGMDYIysifgkg---------atpfngaKWRSYSVLGTLSYML 296 Parachlamydia acanthamoebae
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